Gene : Carub.0002s0550 C. rubella v1.1
Defline:  (1 of 33) PTHR23155//PTHR23155:SF549 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED Genomic Order:  550
Name:  ? Carub.0002s0550 Secondary Identifier:  ? PAC:39243000
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0550 0.5kb upstream 0.5kb upstream 4611 true scaffold_2: 2313841-2318451 Capsella rubella
Carub.0002s0550 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2313841-2314340 Capsella rubella
Carub.0002s0550 0.5kb downstream 0.5kb downstream 4611 true scaffold_2: 2314341-2318951 Capsella rubella
Carub.0002s0550 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2318452-2318951 Capsella rubella
Carub.0002s0550 1.0kb upstream 1.0kb upstream 5111 true scaffold_2: 2313341-2318451 Capsella rubella
Carub.0002s0550 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2313341-2314340 Capsella rubella
Carub.0002s0550 1.0kb downstream 1.0kb downstream 5111 true scaffold_2: 2314341-2319451 Capsella rubella
Carub.0002s0550 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2318452-2319451 Capsella rubella
Carub.0002s0550 2.0kb upstream 2.0kb upstream 6111 true scaffold_2: 2312341-2318451 Capsella rubella
Carub.0002s0550 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2312341-2314340 Capsella rubella
Carub.0002s0550 2.0kb downstream 2.0kb downstream 6111 true scaffold_2: 2314341-2320451 Capsella rubella
Carub.0002s0550 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2318452-2320451 Capsella rubella
Carub.0002s0550 5.0kb upstream 5.0kb upstream 9111 true scaffold_2: 2309341-2318451 Capsella rubella
Carub.0002s0550 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2309341-2314340 Capsella rubella
Carub.0002s0550 5.0kb downstream 5.0kb downstream 9111 true scaffold_2: 2314341-2323451 Capsella rubella
Carub.0002s0550 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2318452-2323451 Capsella rubella
Carub.0002s0550 10.0kb upstream 10.0kb upstream 14111 true scaffold_2: 2304341-2318451 Capsella rubella
Carub.0002s0550 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2304341-2314340 Capsella rubella
Carub.0002s0550 10.0kb downstream 10.0kb downstream 14111 true scaffold_2: 2314341-2328451 Capsella rubella
Carub.0002s0550 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2318452-2328451 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381597 5261 Brassicaceae View MSA
123841874 5264 Brassicales-Malvales View MSA
124350995 5266 SBM View MSA
124253634 5268 Malvidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain