Gene : Carub.0002s0769 C. rubella v1.1

Defline:  (1 of 2) K02736 - 20S proteasome subunit beta 7 (PSMB4) Genomic Order:  769
Name:  ? Carub.0002s0769 Secondary Identifier:  ? PAC:39245883

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0769 0.5kb upstream 0.5kb upstream 3248 true scaffold_2: 3566182-3569429 Capsella rubella
Carub.0002s0769 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3568930-3569429 Capsella rubella
Carub.0002s0769 0.5kb downstream 0.5kb downstream 3248 true scaffold_2: 3565682-3568929 Capsella rubella
Carub.0002s0769 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3565682-3566181 Capsella rubella
Carub.0002s0769 1.0kb upstream 1.0kb upstream 3748 true scaffold_2: 3566182-3569929 Capsella rubella
Carub.0002s0769 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3568930-3569929 Capsella rubella
Carub.0002s0769 1.0kb downstream 1.0kb downstream 3748 true scaffold_2: 3565182-3568929 Capsella rubella
Carub.0002s0769 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3565182-3566181 Capsella rubella
Carub.0002s0769 2.0kb upstream 2.0kb upstream 4748 true scaffold_2: 3566182-3570929 Capsella rubella
Carub.0002s0769 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3568930-3570929 Capsella rubella
Carub.0002s0769 2.0kb downstream 2.0kb downstream 4748 true scaffold_2: 3564182-3568929 Capsella rubella
Carub.0002s0769 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3564182-3566181 Capsella rubella
Carub.0002s0769 5.0kb upstream 5.0kb upstream 7748 true scaffold_2: 3566182-3573929 Capsella rubella
Carub.0002s0769 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3568930-3573929 Capsella rubella
Carub.0002s0769 5.0kb downstream 5.0kb downstream 7748 true scaffold_2: 3561182-3568929 Capsella rubella
Carub.0002s0769 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3561182-3566181 Capsella rubella
Carub.0002s0769 10.0kb upstream 10.0kb upstream 12748 true scaffold_2: 3566182-3578929 Capsella rubella
Carub.0002s0769 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3568930-3578929 Capsella rubella
Carub.0002s0769 10.0kb downstream 10.0kb downstream 12748 true scaffold_2: 3556182-3568929 Capsella rubella
Carub.0002s0769 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3556182-3566181 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377102 5261 Brassicaceae View MSA
123838230 5264 Brassicales-Malvales View MSA
124339371 5266 SBM View MSA
124240458 5268 Malvidae View MSA
124062150 5270 Rosid View MSA
123753657 5271 Pentapetalae View MSA
122793050 5272 Eudicot View MSA
122044971 5273 Angiosperm View MSA
121346476 5274 Embryophyte View MSA
123423883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain