Gene : Carub.0006s1114 C. rubella v1.1
Defline:  (1 of 3) PTHR10024//PTHR10024:SF243 - SYNAPTOTAGMIN // ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  1114
Name:  ? Carub.0006s1114 Secondary Identifier:  ? PAC:39248154
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1114 0.5kb upstream 0.5kb upstream 2810 true scaffold_6: 4096812-4099621 Capsella rubella
Carub.0006s1114 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4096812-4097311 Capsella rubella
Carub.0006s1114 0.5kb downstream 0.5kb downstream 2810 true scaffold_6: 4097312-4100121 Capsella rubella
Carub.0006s1114 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4099622-4100121 Capsella rubella
Carub.0006s1114 1.0kb upstream 1.0kb upstream 3310 true scaffold_6: 4096312-4099621 Capsella rubella
Carub.0006s1114 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4096312-4097311 Capsella rubella
Carub.0006s1114 1.0kb downstream 1.0kb downstream 3310 true scaffold_6: 4097312-4100621 Capsella rubella
Carub.0006s1114 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4099622-4100621 Capsella rubella
Carub.0006s1114 2.0kb upstream 2.0kb upstream 4310 true scaffold_6: 4095312-4099621 Capsella rubella
Carub.0006s1114 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4095312-4097311 Capsella rubella
Carub.0006s1114 2.0kb downstream 2.0kb downstream 4310 true scaffold_6: 4097312-4101621 Capsella rubella
Carub.0006s1114 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4099622-4101621 Capsella rubella
Carub.0006s1114 5.0kb upstream 5.0kb upstream 7310 true scaffold_6: 4092312-4099621 Capsella rubella
Carub.0006s1114 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4092312-4097311 Capsella rubella
Carub.0006s1114 5.0kb downstream 5.0kb downstream 7310 true scaffold_6: 4097312-4104621 Capsella rubella
Carub.0006s1114 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4099622-4104621 Capsella rubella
Carub.0006s1114 10.0kb upstream 10.0kb upstream 12310 true scaffold_6: 4087312-4099621 Capsella rubella
Carub.0006s1114 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4087312-4097311 Capsella rubella
Carub.0006s1114 10.0kb downstream 10.0kb downstream 12310 true scaffold_6: 4097312-4109621 Capsella rubella
Carub.0006s1114 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4099622-4109621 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368533 5261 Brassicaceae View MSA
123839886 5264 Brassicales-Malvales View MSA
124340246 5266 SBM View MSA
124251050 5268 Malvidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain