Gene : Carub.0002s0794 C. rubella v1.1
Defline:  (1 of 6) PTHR23201//PTHR23201:SF10 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED GASA/GAST/SNAKIN FAMILY PROTEIN-RELATED Genomic Order:  794
Name:  ? Carub.0002s0794 Secondary Identifier:  ? PAC:39244588
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0794 0.5kb upstream 0.5kb upstream 1099 true scaffold_2: 3683062-3684160 Capsella rubella
Carub.0002s0794 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3683661-3684160 Capsella rubella
Carub.0002s0794 0.5kb downstream 0.5kb downstream 1099 true scaffold_2: 3682562-3683660 Capsella rubella
Carub.0002s0794 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3682562-3683061 Capsella rubella
Carub.0002s0794 1.0kb upstream 1.0kb upstream 1599 true scaffold_2: 3683062-3684660 Capsella rubella
Carub.0002s0794 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3683661-3684660 Capsella rubella
Carub.0002s0794 1.0kb downstream 1.0kb downstream 1599 true scaffold_2: 3682062-3683660 Capsella rubella
Carub.0002s0794 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3682062-3683061 Capsella rubella
Carub.0002s0794 2.0kb upstream 2.0kb upstream 2599 true scaffold_2: 3683062-3685660 Capsella rubella
Carub.0002s0794 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3683661-3685660 Capsella rubella
Carub.0002s0794 2.0kb downstream 2.0kb downstream 2599 true scaffold_2: 3681062-3683660 Capsella rubella
Carub.0002s0794 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3681062-3683061 Capsella rubella
Carub.0002s0794 5.0kb upstream 5.0kb upstream 5599 true scaffold_2: 3683062-3688660 Capsella rubella
Carub.0002s0794 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3683661-3688660 Capsella rubella
Carub.0002s0794 5.0kb downstream 5.0kb downstream 5599 true scaffold_2: 3678062-3683660 Capsella rubella
Carub.0002s0794 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3678062-3683061 Capsella rubella
Carub.0002s0794 10.0kb upstream 10.0kb upstream 10599 true scaffold_2: 3683062-3693660 Capsella rubella
Carub.0002s0794 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3683661-3693660 Capsella rubella
Carub.0002s0794 10.0kb downstream 10.0kb downstream 10599 true scaffold_2: 3673062-3683660 Capsella rubella
Carub.0002s0794 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3673062-3683061 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379327 5261 Brassicaceae View MSA
123833908 5264 Brassicales-Malvales View MSA
124344537 5266 SBM View MSA
124252864 5268 Malvidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain