Gene : Carub.0002s0816 C. rubella v1.1
Defline:  (1 of 2) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  816
Name:  ? Carub.0002s0816 Secondary Identifier:  ? PAC:39245511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s0816 0.5kb upstream 0.5kb upstream 4913 true scaffold_2: 3779266-3784178 Capsella rubella
Carub.0002s0816 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3783679-3784178 Capsella rubella
Carub.0002s0816 0.5kb downstream 0.5kb downstream 4913 true scaffold_2: 3778766-3783678 Capsella rubella
Carub.0002s0816 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3778766-3779265 Capsella rubella
Carub.0002s0816 1.0kb upstream 1.0kb upstream 5413 true scaffold_2: 3779266-3784678 Capsella rubella
Carub.0002s0816 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3783679-3784678 Capsella rubella
Carub.0002s0816 1.0kb downstream 1.0kb downstream 5413 true scaffold_2: 3778266-3783678 Capsella rubella
Carub.0002s0816 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3778266-3779265 Capsella rubella
Carub.0002s0816 2.0kb upstream 2.0kb upstream 6413 true scaffold_2: 3779266-3785678 Capsella rubella
Carub.0002s0816 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3783679-3785678 Capsella rubella
Carub.0002s0816 2.0kb downstream 2.0kb downstream 6413 true scaffold_2: 3777266-3783678 Capsella rubella
Carub.0002s0816 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3777266-3779265 Capsella rubella
Carub.0002s0816 5.0kb upstream 5.0kb upstream 9413 true scaffold_2: 3779266-3788678 Capsella rubella
Carub.0002s0816 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3783679-3788678 Capsella rubella
Carub.0002s0816 5.0kb downstream 5.0kb downstream 9413 true scaffold_2: 3774266-3783678 Capsella rubella
Carub.0002s0816 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3774266-3779265 Capsella rubella
Carub.0002s0816 10.0kb upstream 10.0kb upstream 14413 true scaffold_2: 3779266-3793678 Capsella rubella
Carub.0002s0816 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3783679-3793678 Capsella rubella
Carub.0002s0816 10.0kb downstream 10.0kb downstream 14413 true scaffold_2: 3769266-3783678 Capsella rubella
Carub.0002s0816 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3769266-3779265 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122366906 5261 Brassicaceae View MSA
123837943 5264 Brassicales-Malvales View MSA
124344316 5266 SBM View MSA
124245222 5268 Malvidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain