Gene : Carub.0007s1749 C. rubella v1.1

Defline:  (1 of 1) PTHR24349//PTHR24349:SF95 - SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 3 Genomic Order:  1749
Name:  ? Carub.0007s1749 Secondary Identifier:  ? PAC:39233034

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1749 0.5kb upstream 0.5kb upstream 3252 true scaffold_7: 6537599-6540850 Capsella rubella
Carub.0007s1749 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6537599-6538098 Capsella rubella
Carub.0007s1749 0.5kb downstream 0.5kb downstream 3252 true scaffold_7: 6538099-6541350 Capsella rubella
Carub.0007s1749 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6540851-6541350 Capsella rubella
Carub.0007s1749 1.0kb upstream 1.0kb upstream 3752 true scaffold_7: 6537099-6540850 Capsella rubella
Carub.0007s1749 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6537099-6538098 Capsella rubella
Carub.0007s1749 1.0kb downstream 1.0kb downstream 3752 true scaffold_7: 6538099-6541850 Capsella rubella
Carub.0007s1749 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6540851-6541850 Capsella rubella
Carub.0007s1749 2.0kb upstream 2.0kb upstream 4752 true scaffold_7: 6536099-6540850 Capsella rubella
Carub.0007s1749 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6536099-6538098 Capsella rubella
Carub.0007s1749 2.0kb downstream 2.0kb downstream 4752 true scaffold_7: 6538099-6542850 Capsella rubella
Carub.0007s1749 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6540851-6542850 Capsella rubella
Carub.0007s1749 5.0kb upstream 5.0kb upstream 7752 true scaffold_7: 6533099-6540850 Capsella rubella
Carub.0007s1749 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6533099-6538098 Capsella rubella
Carub.0007s1749 5.0kb downstream 5.0kb downstream 7752 true scaffold_7: 6538099-6545850 Capsella rubella
Carub.0007s1749 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6540851-6545850 Capsella rubella
Carub.0007s1749 10.0kb upstream 10.0kb upstream 12752 true scaffold_7: 6528099-6540850 Capsella rubella
Carub.0007s1749 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6528099-6538098 Capsella rubella
Carub.0007s1749 10.0kb downstream 10.0kb downstream 12752 true scaffold_7: 6538099-6550850 Capsella rubella
Carub.0007s1749 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6540851-6550850 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363556 5261 Brassicaceae View MSA
123833660 5264 Brassicales-Malvales View MSA
124343506 5266 SBM View MSA
124239172 5268 Malvidae View MSA
124061740 5270 Rosid View MSA
123741136 5271 Pentapetalae View MSA
122788703 5272 Eudicot View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain