Gene : Carub.0007s1748 C. rubella v1.1
Defline:  (1 of 1) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  1748
Name:  ? Carub.0007s1748 Secondary Identifier:  ? PAC:39235165
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5871 Capsella rubella pathologic  
Crubella PWY-5872 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1748 0.5kb upstream 0.5kb upstream 4544 true scaffold_7: 6533338-6537881 Capsella rubella
Carub.0007s1748 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6533338-6533837 Capsella rubella
Carub.0007s1748 0.5kb downstream 0.5kb downstream 4544 true scaffold_7: 6533838-6538381 Capsella rubella
Carub.0007s1748 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6537882-6538381 Capsella rubella
Carub.0007s1748 1.0kb upstream 1.0kb upstream 5044 true scaffold_7: 6532838-6537881 Capsella rubella
Carub.0007s1748 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6532838-6533837 Capsella rubella
Carub.0007s1748 1.0kb downstream 1.0kb downstream 5044 true scaffold_7: 6533838-6538881 Capsella rubella
Carub.0007s1748 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6537882-6538881 Capsella rubella
Carub.0007s1748 2.0kb upstream 2.0kb upstream 6044 true scaffold_7: 6531838-6537881 Capsella rubella
Carub.0007s1748 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6531838-6533837 Capsella rubella
Carub.0007s1748 2.0kb downstream 2.0kb downstream 6044 true scaffold_7: 6533838-6539881 Capsella rubella
Carub.0007s1748 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6537882-6539881 Capsella rubella
Carub.0007s1748 5.0kb upstream 5.0kb upstream 9044 true scaffold_7: 6528838-6537881 Capsella rubella
Carub.0007s1748 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6528838-6533837 Capsella rubella
Carub.0007s1748 5.0kb downstream 5.0kb downstream 9044 true scaffold_7: 6533838-6542881 Capsella rubella
Carub.0007s1748 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6537882-6542881 Capsella rubella
Carub.0007s1748 10.0kb upstream 10.0kb upstream 14044 true scaffold_7: 6523838-6537881 Capsella rubella
Carub.0007s1748 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6523838-6533837 Capsella rubella
Carub.0007s1748 10.0kb downstream 10.0kb downstream 14044 true scaffold_7: 6533838-6547881 Capsella rubella
Carub.0007s1748 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6537882-6547881 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374084 5261 Brassicaceae View MSA
123828873 5264 Brassicales-Malvales View MSA
124338665 5266 SBM View MSA
124252362 5268 Malvidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain