Gene : Carub.0007s1961 C. rubella v1.1
Defline:  (1 of 5) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Genomic Order:  1961
Name:  ? Carub.0007s1961 Secondary Identifier:  ? PAC:39232520
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1961 0.5kb upstream 0.5kb upstream 3272 true scaffold_7: 7340145-7343416 Capsella rubella
Carub.0007s1961 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7342917-7343416 Capsella rubella
Carub.0007s1961 0.5kb downstream 0.5kb downstream 3272 true scaffold_7: 7339645-7342916 Capsella rubella
Carub.0007s1961 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7339645-7340144 Capsella rubella
Carub.0007s1961 1.0kb upstream 1.0kb upstream 3772 true scaffold_7: 7340145-7343916 Capsella rubella
Carub.0007s1961 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7342917-7343916 Capsella rubella
Carub.0007s1961 1.0kb downstream 1.0kb downstream 3772 true scaffold_7: 7339145-7342916 Capsella rubella
Carub.0007s1961 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7339145-7340144 Capsella rubella
Carub.0007s1961 2.0kb upstream 2.0kb upstream 4772 true scaffold_7: 7340145-7344916 Capsella rubella
Carub.0007s1961 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7342917-7344916 Capsella rubella
Carub.0007s1961 2.0kb downstream 2.0kb downstream 4772 true scaffold_7: 7338145-7342916 Capsella rubella
Carub.0007s1961 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7338145-7340144 Capsella rubella
Carub.0007s1961 5.0kb upstream 5.0kb upstream 7772 true scaffold_7: 7340145-7347916 Capsella rubella
Carub.0007s1961 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7342917-7347916 Capsella rubella
Carub.0007s1961 5.0kb downstream 5.0kb downstream 7772 true scaffold_7: 7335145-7342916 Capsella rubella
Carub.0007s1961 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7335145-7340144 Capsella rubella
Carub.0007s1961 10.0kb upstream 10.0kb upstream 12772 true scaffold_7: 7340145-7352916 Capsella rubella
Carub.0007s1961 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7342917-7352916 Capsella rubella
Carub.0007s1961 10.0kb downstream 10.0kb downstream 12772 true scaffold_7: 7330145-7342916 Capsella rubella
Carub.0007s1961 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7330145-7340144 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363451 5261 Brassicaceae View MSA
123834565 5264 Brassicales-Malvales View MSA
124343488 5266 SBM View MSA
124248985 5268 Malvidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain