Gene : Carub.0007s1815 C. rubella v1.1
Defline:  (1 of 2) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase Genomic Order:  1815
Name:  ? Carub.0007s1815 Secondary Identifier:  ? PAC:39233282
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUTATHIONESYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1815 0.5kb upstream 0.5kb upstream 4617 true scaffold_7: 6799337-6803953 Capsella rubella
Carub.0007s1815 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6799337-6799836 Capsella rubella
Carub.0007s1815 0.5kb downstream 0.5kb downstream 4617 true scaffold_7: 6799837-6804453 Capsella rubella
Carub.0007s1815 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6803954-6804453 Capsella rubella
Carub.0007s1815 1.0kb upstream 1.0kb upstream 5117 true scaffold_7: 6798837-6803953 Capsella rubella
Carub.0007s1815 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6798837-6799836 Capsella rubella
Carub.0007s1815 1.0kb downstream 1.0kb downstream 5117 true scaffold_7: 6799837-6804953 Capsella rubella
Carub.0007s1815 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6803954-6804953 Capsella rubella
Carub.0007s1815 2.0kb upstream 2.0kb upstream 6117 true scaffold_7: 6797837-6803953 Capsella rubella
Carub.0007s1815 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6797837-6799836 Capsella rubella
Carub.0007s1815 2.0kb downstream 2.0kb downstream 6117 true scaffold_7: 6799837-6805953 Capsella rubella
Carub.0007s1815 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6803954-6805953 Capsella rubella
Carub.0007s1815 5.0kb upstream 5.0kb upstream 9117 true scaffold_7: 6794837-6803953 Capsella rubella
Carub.0007s1815 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6794837-6799836 Capsella rubella
Carub.0007s1815 5.0kb downstream 5.0kb downstream 9117 true scaffold_7: 6799837-6808953 Capsella rubella
Carub.0007s1815 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6803954-6808953 Capsella rubella
Carub.0007s1815 10.0kb upstream 10.0kb upstream 14117 true scaffold_7: 6789837-6803953 Capsella rubella
Carub.0007s1815 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6789837-6799836 Capsella rubella
Carub.0007s1815 10.0kb downstream 10.0kb downstream 14117 true scaffold_7: 6799837-6813953 Capsella rubella
Carub.0007s1815 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6803954-6813953 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369004 5261 Brassicaceae View MSA
123839403 5264 Brassicales-Malvales View MSA
124343642 5266 SBM View MSA
124247556 5268 Malvidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain