Gene : Carub.0007s1872 C. rubella v1.1
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  1872
Name:  ? Carub.0007s1872 Secondary Identifier:  ? PAC:39232505
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1872 0.5kb upstream 0.5kb upstream 3480 true scaffold_7: 7036880-7040359 Capsella rubella
Carub.0007s1872 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 7036880-7037379 Capsella rubella
Carub.0007s1872 0.5kb downstream 0.5kb downstream 3480 true scaffold_7: 7037380-7040859 Capsella rubella
Carub.0007s1872 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 7040360-7040859 Capsella rubella
Carub.0007s1872 1.0kb upstream 1.0kb upstream 3980 true scaffold_7: 7036380-7040359 Capsella rubella
Carub.0007s1872 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 7036380-7037379 Capsella rubella
Carub.0007s1872 1.0kb downstream 1.0kb downstream 3980 true scaffold_7: 7037380-7041359 Capsella rubella
Carub.0007s1872 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 7040360-7041359 Capsella rubella
Carub.0007s1872 2.0kb upstream 2.0kb upstream 4980 true scaffold_7: 7035380-7040359 Capsella rubella
Carub.0007s1872 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 7035380-7037379 Capsella rubella
Carub.0007s1872 2.0kb downstream 2.0kb downstream 4980 true scaffold_7: 7037380-7042359 Capsella rubella
Carub.0007s1872 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 7040360-7042359 Capsella rubella
Carub.0007s1872 5.0kb upstream 5.0kb upstream 7980 true scaffold_7: 7032380-7040359 Capsella rubella
Carub.0007s1872 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 7032380-7037379 Capsella rubella
Carub.0007s1872 5.0kb downstream 5.0kb downstream 7980 true scaffold_7: 7037380-7045359 Capsella rubella
Carub.0007s1872 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 7040360-7045359 Capsella rubella
Carub.0007s1872 10.0kb upstream 10.0kb upstream 12980 true scaffold_7: 7027380-7040359 Capsella rubella
Carub.0007s1872 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 7027380-7037379 Capsella rubella
Carub.0007s1872 10.0kb downstream 10.0kb downstream 12980 true scaffold_7: 7037380-7050359 Capsella rubella
Carub.0007s1872 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 7040360-7050359 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363006 5261 Brassicaceae View MSA
123840716 5264 Brassicales-Malvales View MSA
124337045 5266 SBM View MSA
124240902 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain