Gene : Carub.0007s1596 C. rubella v1.1
Defline:  (1 of 1) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  1596
Name:  ? Carub.0007s1596 Secondary Identifier:  ? PAC:39233756
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella CHLOROPHYLL-SYN Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1596 0.5kb upstream 0.5kb upstream 2380 true scaffold_7: 5936169-5938548 Capsella rubella
Carub.0007s1596 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5938049-5938548 Capsella rubella
Carub.0007s1596 0.5kb downstream 0.5kb downstream 2380 true scaffold_7: 5935669-5938048 Capsella rubella
Carub.0007s1596 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5935669-5936168 Capsella rubella
Carub.0007s1596 1.0kb upstream 1.0kb upstream 2880 true scaffold_7: 5936169-5939048 Capsella rubella
Carub.0007s1596 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5938049-5939048 Capsella rubella
Carub.0007s1596 1.0kb downstream 1.0kb downstream 2880 true scaffold_7: 5935169-5938048 Capsella rubella
Carub.0007s1596 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5935169-5936168 Capsella rubella
Carub.0007s1596 2.0kb upstream 2.0kb upstream 3880 true scaffold_7: 5936169-5940048 Capsella rubella
Carub.0007s1596 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5938049-5940048 Capsella rubella
Carub.0007s1596 2.0kb downstream 2.0kb downstream 3880 true scaffold_7: 5934169-5938048 Capsella rubella
Carub.0007s1596 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5934169-5936168 Capsella rubella
Carub.0007s1596 5.0kb upstream 5.0kb upstream 6880 true scaffold_7: 5936169-5943048 Capsella rubella
Carub.0007s1596 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5938049-5943048 Capsella rubella
Carub.0007s1596 5.0kb downstream 5.0kb downstream 6880 true scaffold_7: 5931169-5938048 Capsella rubella
Carub.0007s1596 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5931169-5936168 Capsella rubella
Carub.0007s1596 10.0kb upstream 10.0kb upstream 11880 true scaffold_7: 5936169-5948048 Capsella rubella
Carub.0007s1596 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5938049-5948048 Capsella rubella
Carub.0007s1596 10.0kb downstream 10.0kb downstream 11880 true scaffold_7: 5926169-5938048 Capsella rubella
Carub.0007s1596 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5926169-5936168 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377019 5261 Brassicaceae View MSA
123828001 5264 Brassicales-Malvales View MSA
124344957 5266 SBM View MSA
124250095 5268 Malvidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain