Gene : Carub.0007s1616 C. rubella v1.1
Defline:  (1 of 2) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  1616
Name:  ? Carub.0007s1616 Secondary Identifier:  ? PAC:39233695
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1616 0.5kb upstream 0.5kb upstream 2434 true scaffold_7: 5992936-5995369 Capsella rubella
Carub.0007s1616 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5994870-5995369 Capsella rubella
Carub.0007s1616 0.5kb downstream 0.5kb downstream 2434 true scaffold_7: 5992436-5994869 Capsella rubella
Carub.0007s1616 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5992436-5992935 Capsella rubella
Carub.0007s1616 1.0kb upstream 1.0kb upstream 2934 true scaffold_7: 5992936-5995869 Capsella rubella
Carub.0007s1616 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5994870-5995869 Capsella rubella
Carub.0007s1616 1.0kb downstream 1.0kb downstream 2934 true scaffold_7: 5991936-5994869 Capsella rubella
Carub.0007s1616 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5991936-5992935 Capsella rubella
Carub.0007s1616 2.0kb upstream 2.0kb upstream 3934 true scaffold_7: 5992936-5996869 Capsella rubella
Carub.0007s1616 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5994870-5996869 Capsella rubella
Carub.0007s1616 2.0kb downstream 2.0kb downstream 3934 true scaffold_7: 5990936-5994869 Capsella rubella
Carub.0007s1616 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5990936-5992935 Capsella rubella
Carub.0007s1616 5.0kb upstream 5.0kb upstream 6934 true scaffold_7: 5992936-5999869 Capsella rubella
Carub.0007s1616 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5994870-5999869 Capsella rubella
Carub.0007s1616 5.0kb downstream 5.0kb downstream 6934 true scaffold_7: 5987936-5994869 Capsella rubella
Carub.0007s1616 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5987936-5992935 Capsella rubella
Carub.0007s1616 10.0kb upstream 10.0kb upstream 11934 true scaffold_7: 5992936-6004869 Capsella rubella
Carub.0007s1616 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5994870-6004869 Capsella rubella
Carub.0007s1616 10.0kb downstream 10.0kb downstream 11934 true scaffold_7: 5982936-5994869 Capsella rubella
Carub.0007s1616 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5982936-5992935 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657201 5273 Angiosperm View MSA
122335494 5261 Brassicaceae Singleton cluster - no MSA
123776259 5264 Brassicales-Malvales Singleton cluster - no MSA
124274653 5266 SBM Singleton cluster - no MSA
124252581 5268 Malvidae View MSA
124038615 5270 Rosid View MSA
123610896 5271 Pentapetalae View MSA
122645485 5272 Eudicot View MSA
120929246 5274 Embryophyte View MSA
122969815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain