Gene : Carub.0007s1675 C. rubella v1.1
Defline:  (1 of 4) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1675
Name:  ? Carub.0007s1675 Secondary Identifier:  ? PAC:39234092
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1675 0.5kb upstream 0.5kb upstream 4797 true scaffold_7: 6234340-6239136 Capsella rubella
Carub.0007s1675 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6238637-6239136 Capsella rubella
Carub.0007s1675 0.5kb downstream 0.5kb downstream 4797 true scaffold_7: 6233840-6238636 Capsella rubella
Carub.0007s1675 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6233840-6234339 Capsella rubella
Carub.0007s1675 1.0kb upstream 1.0kb upstream 5297 true scaffold_7: 6234340-6239636 Capsella rubella
Carub.0007s1675 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6238637-6239636 Capsella rubella
Carub.0007s1675 1.0kb downstream 1.0kb downstream 5297 true scaffold_7: 6233340-6238636 Capsella rubella
Carub.0007s1675 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6233340-6234339 Capsella rubella
Carub.0007s1675 2.0kb upstream 2.0kb upstream 6297 true scaffold_7: 6234340-6240636 Capsella rubella
Carub.0007s1675 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6238637-6240636 Capsella rubella
Carub.0007s1675 2.0kb downstream 2.0kb downstream 6297 true scaffold_7: 6232340-6238636 Capsella rubella
Carub.0007s1675 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6232340-6234339 Capsella rubella
Carub.0007s1675 5.0kb upstream 5.0kb upstream 9297 true scaffold_7: 6234340-6243636 Capsella rubella
Carub.0007s1675 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6238637-6243636 Capsella rubella
Carub.0007s1675 5.0kb downstream 5.0kb downstream 9297 true scaffold_7: 6229340-6238636 Capsella rubella
Carub.0007s1675 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6229340-6234339 Capsella rubella
Carub.0007s1675 10.0kb upstream 10.0kb upstream 14297 true scaffold_7: 6234340-6248636 Capsella rubella
Carub.0007s1675 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6238637-6248636 Capsella rubella
Carub.0007s1675 10.0kb downstream 10.0kb downstream 14297 true scaffold_7: 6224340-6238636 Capsella rubella
Carub.0007s1675 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6224340-6234339 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367966 5261 Brassicaceae View MSA
123831701 5264 Brassicales-Malvales View MSA
124339713 5266 SBM View MSA
124252893 5268 Malvidae View MSA
124064187 5270 Rosid View MSA
123748363 5271 Pentapetalae View MSA
122787729 5272 Eudicot View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain