Gene : Carub.0007s1704 C. rubella v1.1
Defline:  (1 of 4) PTHR24320:SF81 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  1704
Name:  ? Carub.0007s1704 Secondary Identifier:  ? PAC:39234808
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5080 Capsella rubella pathologic  
Crubella PWY-6433 Capsella rubella pathologic  
Crubella PWY-6598 Capsella rubella pathologic  
Crubella PWY-7036 Capsella rubella pathologic  
Crubella PWY-7601 Capsella rubella pathologic  
Crubella PWY-7606 Capsella rubella pathologic  
Crubella PWY-7619 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1704 0.5kb upstream 0.5kb upstream 3510 true scaffold_7: 6344669-6348178 Capsella rubella
Carub.0007s1704 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6347679-6348178 Capsella rubella
Carub.0007s1704 0.5kb downstream 0.5kb downstream 3510 true scaffold_7: 6344169-6347678 Capsella rubella
Carub.0007s1704 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6344169-6344668 Capsella rubella
Carub.0007s1704 1.0kb upstream 1.0kb upstream 4010 true scaffold_7: 6344669-6348678 Capsella rubella
Carub.0007s1704 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6347679-6348678 Capsella rubella
Carub.0007s1704 1.0kb downstream 1.0kb downstream 4010 true scaffold_7: 6343669-6347678 Capsella rubella
Carub.0007s1704 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6343669-6344668 Capsella rubella
Carub.0007s1704 2.0kb upstream 2.0kb upstream 5010 true scaffold_7: 6344669-6349678 Capsella rubella
Carub.0007s1704 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6347679-6349678 Capsella rubella
Carub.0007s1704 2.0kb downstream 2.0kb downstream 5010 true scaffold_7: 6342669-6347678 Capsella rubella
Carub.0007s1704 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6342669-6344668 Capsella rubella
Carub.0007s1704 5.0kb upstream 5.0kb upstream 8010 true scaffold_7: 6344669-6352678 Capsella rubella
Carub.0007s1704 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6347679-6352678 Capsella rubella
Carub.0007s1704 5.0kb downstream 5.0kb downstream 8010 true scaffold_7: 6339669-6347678 Capsella rubella
Carub.0007s1704 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6339669-6344668 Capsella rubella
Carub.0007s1704 10.0kb upstream 10.0kb upstream 13010 true scaffold_7: 6344669-6357678 Capsella rubella
Carub.0007s1704 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6347679-6357678 Capsella rubella
Carub.0007s1704 10.0kb downstream 10.0kb downstream 13010 true scaffold_7: 6334669-6347678 Capsella rubella
Carub.0007s1704 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6334669-6344668 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365248 5261 Brassicaceae View MSA
123831890 5264 Brassicales-Malvales View MSA
124336422 5266 SBM View MSA
124243472 5268 Malvidae View MSA
124064586 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain