Gene : Carub.0007s1713 C. rubella v1.1
Defline:  (1 of 3) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  1713
Name:  ? Carub.0007s1713 Secondary Identifier:  ? PAC:39232895
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1713 0.5kb upstream 0.5kb upstream 3090 true scaffold_7: 6396869-6399958 Capsella rubella
Carub.0007s1713 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 6399459-6399958 Capsella rubella
Carub.0007s1713 0.5kb downstream 0.5kb downstream 3090 true scaffold_7: 6396369-6399458 Capsella rubella
Carub.0007s1713 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 6396369-6396868 Capsella rubella
Carub.0007s1713 1.0kb upstream 1.0kb upstream 3590 true scaffold_7: 6396869-6400458 Capsella rubella
Carub.0007s1713 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 6399459-6400458 Capsella rubella
Carub.0007s1713 1.0kb downstream 1.0kb downstream 3590 true scaffold_7: 6395869-6399458 Capsella rubella
Carub.0007s1713 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 6395869-6396868 Capsella rubella
Carub.0007s1713 2.0kb upstream 2.0kb upstream 4590 true scaffold_7: 6396869-6401458 Capsella rubella
Carub.0007s1713 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 6399459-6401458 Capsella rubella
Carub.0007s1713 2.0kb downstream 2.0kb downstream 4590 true scaffold_7: 6394869-6399458 Capsella rubella
Carub.0007s1713 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 6394869-6396868 Capsella rubella
Carub.0007s1713 5.0kb upstream 5.0kb upstream 7590 true scaffold_7: 6396869-6404458 Capsella rubella
Carub.0007s1713 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 6399459-6404458 Capsella rubella
Carub.0007s1713 5.0kb downstream 5.0kb downstream 7590 true scaffold_7: 6391869-6399458 Capsella rubella
Carub.0007s1713 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 6391869-6396868 Capsella rubella
Carub.0007s1713 10.0kb upstream 10.0kb upstream 12590 true scaffold_7: 6396869-6409458 Capsella rubella
Carub.0007s1713 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 6399459-6409458 Capsella rubella
Carub.0007s1713 10.0kb downstream 10.0kb downstream 12590 true scaffold_7: 6386869-6399458 Capsella rubella
Carub.0007s1713 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 6386869-6396868 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366412 5261 Brassicaceae View MSA
123828986 5264 Brassicales-Malvales View MSA
124321568 5266 SBM View MSA
124241982 5268 Malvidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain