Gene : Carub.0007s1223 C. rubella v1.1
Defline:  (1 of 2) K03028 - 26S proteasome regulatory subunit N1 (PSMD2, RPN1) Genomic Order:  1223
Name:  ? Carub.0007s1223 Secondary Identifier:  ? PAC:39232112
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1223 0.5kb upstream 0.5kb upstream 6136 true scaffold_7: 4685784-4691919 Capsella rubella
Carub.0007s1223 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4685784-4686283 Capsella rubella
Carub.0007s1223 0.5kb downstream 0.5kb downstream 6136 true scaffold_7: 4686284-4692419 Capsella rubella
Carub.0007s1223 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4691920-4692419 Capsella rubella
Carub.0007s1223 1.0kb upstream 1.0kb upstream 6636 true scaffold_7: 4685284-4691919 Capsella rubella
Carub.0007s1223 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4685284-4686283 Capsella rubella
Carub.0007s1223 1.0kb downstream 1.0kb downstream 6636 true scaffold_7: 4686284-4692919 Capsella rubella
Carub.0007s1223 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4691920-4692919 Capsella rubella
Carub.0007s1223 2.0kb upstream 2.0kb upstream 7636 true scaffold_7: 4684284-4691919 Capsella rubella
Carub.0007s1223 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4684284-4686283 Capsella rubella
Carub.0007s1223 2.0kb downstream 2.0kb downstream 7636 true scaffold_7: 4686284-4693919 Capsella rubella
Carub.0007s1223 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4691920-4693919 Capsella rubella
Carub.0007s1223 5.0kb upstream 5.0kb upstream 10636 true scaffold_7: 4681284-4691919 Capsella rubella
Carub.0007s1223 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4681284-4686283 Capsella rubella
Carub.0007s1223 5.0kb downstream 5.0kb downstream 10636 true scaffold_7: 4686284-4696919 Capsella rubella
Carub.0007s1223 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4691920-4696919 Capsella rubella
Carub.0007s1223 10.0kb upstream 10.0kb upstream 15636 true scaffold_7: 4676284-4691919 Capsella rubella
Carub.0007s1223 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4676284-4686283 Capsella rubella
Carub.0007s1223 10.0kb downstream 10.0kb downstream 15636 true scaffold_7: 4686284-4701919 Capsella rubella
Carub.0007s1223 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4691920-4701919 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379635 5261 Brassicaceae View MSA
123827603 5264 Brassicales-Malvales View MSA
124341714 5266 SBM View MSA
124239194 5268 Malvidae View MSA
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain