Gene : Carub.0007s1499 C. rubella v1.1

Defline:  (1 of 2) PTHR24221:SF138 - LP14331P-RELATED Genomic Order:  1499
Name:  ? Carub.0007s1499 Secondary Identifier:  ? PAC:39232303

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1499 0.5kb upstream 0.5kb upstream 6392 true scaffold_7: 5601000-5607391 Capsella rubella
Carub.0007s1499 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5606892-5607391 Capsella rubella
Carub.0007s1499 0.5kb downstream 0.5kb downstream 6392 true scaffold_7: 5600500-5606891 Capsella rubella
Carub.0007s1499 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5600500-5600999 Capsella rubella
Carub.0007s1499 1.0kb upstream 1.0kb upstream 6892 true scaffold_7: 5601000-5607891 Capsella rubella
Carub.0007s1499 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5606892-5607891 Capsella rubella
Carub.0007s1499 1.0kb downstream 1.0kb downstream 6892 true scaffold_7: 5600000-5606891 Capsella rubella
Carub.0007s1499 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5600000-5600999 Capsella rubella
Carub.0007s1499 2.0kb upstream 2.0kb upstream 7892 true scaffold_7: 5601000-5608891 Capsella rubella
Carub.0007s1499 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5606892-5608891 Capsella rubella
Carub.0007s1499 2.0kb downstream 2.0kb downstream 7892 true scaffold_7: 5599000-5606891 Capsella rubella
Carub.0007s1499 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5599000-5600999 Capsella rubella
Carub.0007s1499 5.0kb upstream 5.0kb upstream 10892 true scaffold_7: 5601000-5611891 Capsella rubella
Carub.0007s1499 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5606892-5611891 Capsella rubella
Carub.0007s1499 5.0kb downstream 5.0kb downstream 10892 true scaffold_7: 5596000-5606891 Capsella rubella
Carub.0007s1499 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5596000-5600999 Capsella rubella
Carub.0007s1499 10.0kb upstream 10.0kb upstream 15892 true scaffold_7: 5601000-5616891 Capsella rubella
Carub.0007s1499 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5606892-5616891 Capsella rubella
Carub.0007s1499 10.0kb downstream 10.0kb downstream 15892 true scaffold_7: 5591000-5606891 Capsella rubella
Carub.0007s1499 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5591000-5600999 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360521 5261 Brassicaceae View MSA
123834433 5264 Brassicales-Malvales View MSA
124339926 5266 SBM View MSA
124247808 5268 Malvidae View MSA
124067084 5270 Rosid View MSA
123740508 5271 Pentapetalae View MSA
122789191 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain