Gene : Carub.0007s1540 C. rubella v1.1
Defline:  (1 of 3) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  1540
Name:  ? Carub.0007s1540 Secondary Identifier:  ? PAC:39235380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1540 0.5kb upstream 0.5kb upstream 2709 true scaffold_7: 5735748-5738456 Capsella rubella
Carub.0007s1540 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5737957-5738456 Capsella rubella
Carub.0007s1540 0.5kb downstream 0.5kb downstream 2709 true scaffold_7: 5735248-5737956 Capsella rubella
Carub.0007s1540 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5735248-5735747 Capsella rubella
Carub.0007s1540 1.0kb upstream 1.0kb upstream 3209 true scaffold_7: 5735748-5738956 Capsella rubella
Carub.0007s1540 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5737957-5738956 Capsella rubella
Carub.0007s1540 1.0kb downstream 1.0kb downstream 3209 true scaffold_7: 5734748-5737956 Capsella rubella
Carub.0007s1540 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5734748-5735747 Capsella rubella
Carub.0007s1540 2.0kb upstream 2.0kb upstream 4209 true scaffold_7: 5735748-5739956 Capsella rubella
Carub.0007s1540 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5737957-5739956 Capsella rubella
Carub.0007s1540 2.0kb downstream 2.0kb downstream 4209 true scaffold_7: 5733748-5737956 Capsella rubella
Carub.0007s1540 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5733748-5735747 Capsella rubella
Carub.0007s1540 5.0kb upstream 5.0kb upstream 7209 true scaffold_7: 5735748-5742956 Capsella rubella
Carub.0007s1540 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5737957-5742956 Capsella rubella
Carub.0007s1540 5.0kb downstream 5.0kb downstream 7209 true scaffold_7: 5730748-5737956 Capsella rubella
Carub.0007s1540 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5730748-5735747 Capsella rubella
Carub.0007s1540 10.0kb upstream 10.0kb upstream 12209 true scaffold_7: 5735748-5747956 Capsella rubella
Carub.0007s1540 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5737957-5747956 Capsella rubella
Carub.0007s1540 10.0kb downstream 10.0kb downstream 12209 true scaffold_7: 5725748-5737956 Capsella rubella
Carub.0007s1540 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5725748-5735747 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363938 5261 Brassicaceae View MSA
123798651 5264 Brassicales-Malvales View MSA
124349690 5266 SBM View MSA
124251939 5268 Malvidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain