Gene : Carub.0007s1544 C. rubella v1.1
Defline:  (1 of 1) K08736 - DNA mismatch repair protein MSH3 (MSH3) Genomic Order:  1544
Name:  ? Carub.0007s1544 Secondary Identifier:  ? PAC:39233989
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1544 0.5kb upstream 0.5kb upstream 6096 true scaffold_7: 5746406-5752501 Capsella rubella
Carub.0007s1544 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5746406-5746905 Capsella rubella
Carub.0007s1544 0.5kb downstream 0.5kb downstream 6096 true scaffold_7: 5746906-5753001 Capsella rubella
Carub.0007s1544 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5752502-5753001 Capsella rubella
Carub.0007s1544 1.0kb upstream 1.0kb upstream 6596 true scaffold_7: 5745906-5752501 Capsella rubella
Carub.0007s1544 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5745906-5746905 Capsella rubella
Carub.0007s1544 1.0kb downstream 1.0kb downstream 6596 true scaffold_7: 5746906-5753501 Capsella rubella
Carub.0007s1544 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5752502-5753501 Capsella rubella
Carub.0007s1544 2.0kb upstream 2.0kb upstream 7596 true scaffold_7: 5744906-5752501 Capsella rubella
Carub.0007s1544 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5744906-5746905 Capsella rubella
Carub.0007s1544 2.0kb downstream 2.0kb downstream 7596 true scaffold_7: 5746906-5754501 Capsella rubella
Carub.0007s1544 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5752502-5754501 Capsella rubella
Carub.0007s1544 5.0kb upstream 5.0kb upstream 10596 true scaffold_7: 5741906-5752501 Capsella rubella
Carub.0007s1544 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5741906-5746905 Capsella rubella
Carub.0007s1544 5.0kb downstream 5.0kb downstream 10596 true scaffold_7: 5746906-5757501 Capsella rubella
Carub.0007s1544 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5752502-5757501 Capsella rubella
Carub.0007s1544 10.0kb upstream 10.0kb upstream 15596 true scaffold_7: 5736906-5752501 Capsella rubella
Carub.0007s1544 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5736906-5746905 Capsella rubella
Carub.0007s1544 10.0kb downstream 10.0kb downstream 15596 true scaffold_7: 5746906-5762501 Capsella rubella
Carub.0007s1544 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5752502-5762501 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371810 5261 Brassicaceae View MSA
123829989 5264 Brassicales-Malvales View MSA
124340255 5266 SBM View MSA
124240646 5268 Malvidae View MSA
124067254 5270 Rosid View MSA
123737421 5271 Pentapetalae View MSA
122792724 5272 Eudicot View MSA
122046515 5273 Angiosperm View MSA
121349406 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain