Gene : Carub.0006s1393 C. rubella v1.1
Defline:  (1 of 30) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  1393
Name:  ? Carub.0006s1393 Secondary Identifier:  ? PAC:39249368
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1393 0.5kb upstream 0.5kb upstream 2074 true scaffold_6: 5181701-5183774 Capsella rubella
Carub.0006s1393 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5183275-5183774 Capsella rubella
Carub.0006s1393 0.5kb downstream 0.5kb downstream 2074 true scaffold_6: 5181201-5183274 Capsella rubella
Carub.0006s1393 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5181201-5181700 Capsella rubella
Carub.0006s1393 1.0kb upstream 1.0kb upstream 2574 true scaffold_6: 5181701-5184274 Capsella rubella
Carub.0006s1393 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5183275-5184274 Capsella rubella
Carub.0006s1393 1.0kb downstream 1.0kb downstream 2574 true scaffold_6: 5180701-5183274 Capsella rubella
Carub.0006s1393 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5180701-5181700 Capsella rubella
Carub.0006s1393 2.0kb upstream 2.0kb upstream 3574 true scaffold_6: 5181701-5185274 Capsella rubella
Carub.0006s1393 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5183275-5185274 Capsella rubella
Carub.0006s1393 2.0kb downstream 2.0kb downstream 3574 true scaffold_6: 5179701-5183274 Capsella rubella
Carub.0006s1393 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5179701-5181700 Capsella rubella
Carub.0006s1393 5.0kb upstream 5.0kb upstream 6574 true scaffold_6: 5181701-5188274 Capsella rubella
Carub.0006s1393 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5183275-5188274 Capsella rubella
Carub.0006s1393 5.0kb downstream 5.0kb downstream 6574 true scaffold_6: 5176701-5183274 Capsella rubella
Carub.0006s1393 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5176701-5181700 Capsella rubella
Carub.0006s1393 10.0kb upstream 10.0kb upstream 11574 true scaffold_6: 5181701-5193274 Capsella rubella
Carub.0006s1393 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5183275-5193274 Capsella rubella
Carub.0006s1393 10.0kb downstream 10.0kb downstream 11574 true scaffold_6: 5171701-5183274 Capsella rubella
Carub.0006s1393 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5171701-5181700 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381620 5261 Brassicaceae View MSA
123837302 5264 Brassicales-Malvales View MSA
124345362 5266 SBM View MSA
124240891 5268 Malvidae View MSA
124071328 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain