Gene : Carub.0007s1569 C. rubella v1.1
Defline:  (1 of 5) PTHR31500//PTHR31500:SF18 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1569
Name:  ? Carub.0007s1569 Secondary Identifier:  ? PAC:39232284
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1569 0.5kb upstream 0.5kb upstream 2923 true scaffold_7: 5849395-5852317 Capsella rubella
Carub.0007s1569 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5851818-5852317 Capsella rubella
Carub.0007s1569 0.5kb downstream 0.5kb downstream 2923 true scaffold_7: 5848895-5851817 Capsella rubella
Carub.0007s1569 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5848895-5849394 Capsella rubella
Carub.0007s1569 1.0kb upstream 1.0kb upstream 3423 true scaffold_7: 5849395-5852817 Capsella rubella
Carub.0007s1569 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5851818-5852817 Capsella rubella
Carub.0007s1569 1.0kb downstream 1.0kb downstream 3423 true scaffold_7: 5848395-5851817 Capsella rubella
Carub.0007s1569 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5848395-5849394 Capsella rubella
Carub.0007s1569 2.0kb upstream 2.0kb upstream 4423 true scaffold_7: 5849395-5853817 Capsella rubella
Carub.0007s1569 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5851818-5853817 Capsella rubella
Carub.0007s1569 2.0kb downstream 2.0kb downstream 4423 true scaffold_7: 5847395-5851817 Capsella rubella
Carub.0007s1569 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5847395-5849394 Capsella rubella
Carub.0007s1569 5.0kb upstream 5.0kb upstream 7423 true scaffold_7: 5849395-5856817 Capsella rubella
Carub.0007s1569 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5851818-5856817 Capsella rubella
Carub.0007s1569 5.0kb downstream 5.0kb downstream 7423 true scaffold_7: 5844395-5851817 Capsella rubella
Carub.0007s1569 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5844395-5849394 Capsella rubella
Carub.0007s1569 10.0kb upstream 10.0kb upstream 12423 true scaffold_7: 5849395-5861817 Capsella rubella
Carub.0007s1569 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5851818-5861817 Capsella rubella
Carub.0007s1569 10.0kb downstream 10.0kb downstream 12423 true scaffold_7: 5839395-5851817 Capsella rubella
Carub.0007s1569 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5839395-5849394 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371949 5261 Brassicaceae View MSA
123836603 5264 Brassicales-Malvales View MSA
124340657 5266 SBM View MSA
124251241 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain