Gene : Carub.0007s1126 C. rubella v1.1

Defline:  (1 of 6) PTHR33830:SF1 - DEFENSIN-LIKE PROTEIN 155-RELATED Genomic Order:  1126
Name:  ? Carub.0007s1126 Secondary Identifier:  ? PAC:39232032

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1126 0.5kb upstream 0.5kb upstream 1285 true scaffold_7: 4301130-4302414 Capsella rubella
Carub.0007s1126 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4301130-4301629 Capsella rubella
Carub.0007s1126 0.5kb downstream 0.5kb downstream 1285 true scaffold_7: 4301630-4302914 Capsella rubella
Carub.0007s1126 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4302415-4302914 Capsella rubella
Carub.0007s1126 1.0kb upstream 1.0kb upstream 1785 true scaffold_7: 4300630-4302414 Capsella rubella
Carub.0007s1126 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4300630-4301629 Capsella rubella
Carub.0007s1126 1.0kb downstream 1.0kb downstream 1785 true scaffold_7: 4301630-4303414 Capsella rubella
Carub.0007s1126 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4302415-4303414 Capsella rubella
Carub.0007s1126 2.0kb upstream 2.0kb upstream 2785 true scaffold_7: 4299630-4302414 Capsella rubella
Carub.0007s1126 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4299630-4301629 Capsella rubella
Carub.0007s1126 2.0kb downstream 2.0kb downstream 2785 true scaffold_7: 4301630-4304414 Capsella rubella
Carub.0007s1126 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4302415-4304414 Capsella rubella
Carub.0007s1126 5.0kb upstream 5.0kb upstream 5785 true scaffold_7: 4296630-4302414 Capsella rubella
Carub.0007s1126 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4296630-4301629 Capsella rubella
Carub.0007s1126 5.0kb downstream 5.0kb downstream 5785 true scaffold_7: 4301630-4307414 Capsella rubella
Carub.0007s1126 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4302415-4307414 Capsella rubella
Carub.0007s1126 10.0kb upstream 10.0kb upstream 10785 true scaffold_7: 4291630-4302414 Capsella rubella
Carub.0007s1126 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4291630-4301629 Capsella rubella
Carub.0007s1126 10.0kb downstream 10.0kb downstream 10785 true scaffold_7: 4301630-4312414 Capsella rubella
Carub.0007s1126 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4302415-4312414 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122378813 5261 Brassicaceae View MSA
123802000 5264 Brassicales-Malvales View MSA
124299231 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain