Gene : Carub.0007s1143 C. rubella v1.1
Defline:  (1 of 2) K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Genomic Order:  1143
Name:  ? Carub.0007s1143 Secondary Identifier:  ? PAC:39234273
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1143 0.5kb upstream 0.5kb upstream 2546 true scaffold_7: 4357414-4359959 Capsella rubella
Carub.0007s1143 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4359460-4359959 Capsella rubella
Carub.0007s1143 0.5kb downstream 0.5kb downstream 2546 true scaffold_7: 4356914-4359459 Capsella rubella
Carub.0007s1143 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4356914-4357413 Capsella rubella
Carub.0007s1143 1.0kb upstream 1.0kb upstream 3046 true scaffold_7: 4357414-4360459 Capsella rubella
Carub.0007s1143 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4359460-4360459 Capsella rubella
Carub.0007s1143 1.0kb downstream 1.0kb downstream 3046 true scaffold_7: 4356414-4359459 Capsella rubella
Carub.0007s1143 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4356414-4357413 Capsella rubella
Carub.0007s1143 2.0kb upstream 2.0kb upstream 4046 true scaffold_7: 4357414-4361459 Capsella rubella
Carub.0007s1143 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4359460-4361459 Capsella rubella
Carub.0007s1143 2.0kb downstream 2.0kb downstream 4046 true scaffold_7: 4355414-4359459 Capsella rubella
Carub.0007s1143 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4355414-4357413 Capsella rubella
Carub.0007s1143 5.0kb upstream 5.0kb upstream 7046 true scaffold_7: 4357414-4364459 Capsella rubella
Carub.0007s1143 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4359460-4364459 Capsella rubella
Carub.0007s1143 5.0kb downstream 5.0kb downstream 7046 true scaffold_7: 4352414-4359459 Capsella rubella
Carub.0007s1143 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4352414-4357413 Capsella rubella
Carub.0007s1143 10.0kb upstream 10.0kb upstream 12046 true scaffold_7: 4357414-4369459 Capsella rubella
Carub.0007s1143 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4359460-4369459 Capsella rubella
Carub.0007s1143 10.0kb downstream 10.0kb downstream 12046 true scaffold_7: 4347414-4359459 Capsella rubella
Carub.0007s1143 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4347414-4357413 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375730 5261 Brassicaceae View MSA
123840379 5264 Brassicales-Malvales View MSA
124340180 5266 SBM View MSA
124241353 5268 Malvidae View MSA
124071196 5270 Rosid View MSA
123751251 5271 Pentapetalae View MSA
122786571 5272 Eudicot View MSA
122048548 5273 Angiosperm View MSA
121350329 5274 Embryophyte View MSA
123426511 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain