Gene : Carub.0007s1181 C. rubella v1.1

Defline:  (1 of 1) KOG3420 - Predicted RNA methylase Genomic Order:  1181
Name:  ? Carub.0007s1181 Secondary Identifier:  ? PAC:39232992

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1181 0.5kb upstream 0.5kb upstream 2371 true scaffold_7: 4505403-4507773 Capsella rubella
Carub.0007s1181 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4507274-4507773 Capsella rubella
Carub.0007s1181 0.5kb downstream 0.5kb downstream 2371 true scaffold_7: 4504903-4507273 Capsella rubella
Carub.0007s1181 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4504903-4505402 Capsella rubella
Carub.0007s1181 1.0kb upstream 1.0kb upstream 2871 true scaffold_7: 4505403-4508273 Capsella rubella
Carub.0007s1181 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4507274-4508273 Capsella rubella
Carub.0007s1181 1.0kb downstream 1.0kb downstream 2871 true scaffold_7: 4504403-4507273 Capsella rubella
Carub.0007s1181 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4504403-4505402 Capsella rubella
Carub.0007s1181 2.0kb upstream 2.0kb upstream 3871 true scaffold_7: 4505403-4509273 Capsella rubella
Carub.0007s1181 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4507274-4509273 Capsella rubella
Carub.0007s1181 2.0kb downstream 2.0kb downstream 3871 true scaffold_7: 4503403-4507273 Capsella rubella
Carub.0007s1181 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4503403-4505402 Capsella rubella
Carub.0007s1181 5.0kb upstream 5.0kb upstream 6871 true scaffold_7: 4505403-4512273 Capsella rubella
Carub.0007s1181 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4507274-4512273 Capsella rubella
Carub.0007s1181 5.0kb downstream 5.0kb downstream 6871 true scaffold_7: 4500403-4507273 Capsella rubella
Carub.0007s1181 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4500403-4505402 Capsella rubella
Carub.0007s1181 10.0kb upstream 10.0kb upstream 11871 true scaffold_7: 4505403-4517273 Capsella rubella
Carub.0007s1181 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4507274-4517273 Capsella rubella
Carub.0007s1181 10.0kb downstream 10.0kb downstream 11871 true scaffold_7: 4495403-4507273 Capsella rubella
Carub.0007s1181 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4495403-4505402 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369680 5261 Brassicaceae View MSA
123828406 5264 Brassicales-Malvales View MSA
124341818 5266 SBM View MSA
124243569 5268 Malvidae View MSA
124063475 5270 Rosid View MSA
123737429 5271 Pentapetalae View MSA
122790972 5272 Eudicot View MSA
122044343 5273 Angiosperm View MSA
121351641 5274 Embryophyte View MSA
123425114 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain