Gene : Carub.0007s1191 C. rubella v1.1
Defline:  (1 of 2) PTHR10168//PTHR10168:SF14 - GLUTAREDOXIN // GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  1191
Name:  ? Carub.0007s1191 Secondary Identifier:  ? PAC:39233787
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1191 0.5kb upstream 0.5kb upstream 2280 true scaffold_7: 4545377-4547656 Capsella rubella
Carub.0007s1191 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4547157-4547656 Capsella rubella
Carub.0007s1191 0.5kb downstream 0.5kb downstream 2280 true scaffold_7: 4544877-4547156 Capsella rubella
Carub.0007s1191 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4544877-4545376 Capsella rubella
Carub.0007s1191 1.0kb upstream 1.0kb upstream 2780 true scaffold_7: 4545377-4548156 Capsella rubella
Carub.0007s1191 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4547157-4548156 Capsella rubella
Carub.0007s1191 1.0kb downstream 1.0kb downstream 2780 true scaffold_7: 4544377-4547156 Capsella rubella
Carub.0007s1191 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4544377-4545376 Capsella rubella
Carub.0007s1191 2.0kb upstream 2.0kb upstream 3780 true scaffold_7: 4545377-4549156 Capsella rubella
Carub.0007s1191 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4547157-4549156 Capsella rubella
Carub.0007s1191 2.0kb downstream 2.0kb downstream 3780 true scaffold_7: 4543377-4547156 Capsella rubella
Carub.0007s1191 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4543377-4545376 Capsella rubella
Carub.0007s1191 5.0kb upstream 5.0kb upstream 6780 true scaffold_7: 4545377-4552156 Capsella rubella
Carub.0007s1191 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4547157-4552156 Capsella rubella
Carub.0007s1191 5.0kb downstream 5.0kb downstream 6780 true scaffold_7: 4540377-4547156 Capsella rubella
Carub.0007s1191 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4540377-4545376 Capsella rubella
Carub.0007s1191 10.0kb upstream 10.0kb upstream 11780 true scaffold_7: 4545377-4557156 Capsella rubella
Carub.0007s1191 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4547157-4557156 Capsella rubella
Carub.0007s1191 10.0kb downstream 10.0kb downstream 11780 true scaffold_7: 4535377-4547156 Capsella rubella
Carub.0007s1191 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4535377-4545376 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122378106 5261 Brassicaceae View MSA
123827749 5264 Brassicales-Malvales View MSA
124341249 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain