Gene : Carub.0006s1436 C. rubella v1.1
Defline:  (1 of 33) PF02485 - Core-2/I-Branching enzyme (Branch) Genomic Order:  1436
Name:  ? Carub.0006s1436 Secondary Identifier:  ? PAC:39246377
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1436 0.5kb upstream 0.5kb upstream 3163 true scaffold_6: 5318335-5321497 Capsella rubella
Carub.0006s1436 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5318335-5318834 Capsella rubella
Carub.0006s1436 0.5kb downstream 0.5kb downstream 3163 true scaffold_6: 5318835-5321997 Capsella rubella
Carub.0006s1436 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5321498-5321997 Capsella rubella
Carub.0006s1436 1.0kb upstream 1.0kb upstream 3663 true scaffold_6: 5317835-5321497 Capsella rubella
Carub.0006s1436 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5317835-5318834 Capsella rubella
Carub.0006s1436 1.0kb downstream 1.0kb downstream 3663 true scaffold_6: 5318835-5322497 Capsella rubella
Carub.0006s1436 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5321498-5322497 Capsella rubella
Carub.0006s1436 2.0kb upstream 2.0kb upstream 4663 true scaffold_6: 5316835-5321497 Capsella rubella
Carub.0006s1436 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5316835-5318834 Capsella rubella
Carub.0006s1436 2.0kb downstream 2.0kb downstream 4663 true scaffold_6: 5318835-5323497 Capsella rubella
Carub.0006s1436 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5321498-5323497 Capsella rubella
Carub.0006s1436 5.0kb upstream 5.0kb upstream 7663 true scaffold_6: 5313835-5321497 Capsella rubella
Carub.0006s1436 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5313835-5318834 Capsella rubella
Carub.0006s1436 5.0kb downstream 5.0kb downstream 7663 true scaffold_6: 5318835-5326497 Capsella rubella
Carub.0006s1436 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5321498-5326497 Capsella rubella
Carub.0006s1436 10.0kb upstream 10.0kb upstream 12663 true scaffold_6: 5308835-5321497 Capsella rubella
Carub.0006s1436 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5308835-5318834 Capsella rubella
Carub.0006s1436 10.0kb downstream 10.0kb downstream 12663 true scaffold_6: 5318835-5331497 Capsella rubella
Carub.0006s1436 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5321498-5331497 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368094 5261 Brassicaceae View MSA
123832847 5264 Brassicales-Malvales View MSA
124350412 5266 SBM View MSA
124250808 5268 Malvidae View MSA
124073047 5270 Rosid View MSA
123748428 5271 Pentapetalae View MSA
122794762 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain