Gene : Carub.0007s1309 C. rubella v1.1
Defline:  (1 of 3) PTHR22601:SF22 - OLIGOPEPTIDE TRANSPORTER 6-RELATED Genomic Order:  1309
Name:  ? Carub.0007s1309 Secondary Identifier:  ? PAC:39233283
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1309 0.5kb upstream 0.5kb upstream 3338 true scaffold_7: 4953710-4957047 Capsella rubella
Carub.0007s1309 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4953710-4954209 Capsella rubella
Carub.0007s1309 0.5kb downstream 0.5kb downstream 3338 true scaffold_7: 4954210-4957547 Capsella rubella
Carub.0007s1309 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4957048-4957547 Capsella rubella
Carub.0007s1309 1.0kb upstream 1.0kb upstream 3838 true scaffold_7: 4953210-4957047 Capsella rubella
Carub.0007s1309 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4953210-4954209 Capsella rubella
Carub.0007s1309 1.0kb downstream 1.0kb downstream 3838 true scaffold_7: 4954210-4958047 Capsella rubella
Carub.0007s1309 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4957048-4958047 Capsella rubella
Carub.0007s1309 2.0kb upstream 2.0kb upstream 4838 true scaffold_7: 4952210-4957047 Capsella rubella
Carub.0007s1309 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4952210-4954209 Capsella rubella
Carub.0007s1309 2.0kb downstream 2.0kb downstream 4838 true scaffold_7: 4954210-4959047 Capsella rubella
Carub.0007s1309 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4957048-4959047 Capsella rubella
Carub.0007s1309 5.0kb upstream 5.0kb upstream 7838 true scaffold_7: 4949210-4957047 Capsella rubella
Carub.0007s1309 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4949210-4954209 Capsella rubella
Carub.0007s1309 5.0kb downstream 5.0kb downstream 7838 true scaffold_7: 4954210-4962047 Capsella rubella
Carub.0007s1309 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4957048-4962047 Capsella rubella
Carub.0007s1309 10.0kb upstream 10.0kb upstream 12838 true scaffold_7: 4944210-4957047 Capsella rubella
Carub.0007s1309 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4944210-4954209 Capsella rubella
Carub.0007s1309 10.0kb downstream 10.0kb downstream 12838 true scaffold_7: 4954210-4967047 Capsella rubella
Carub.0007s1309 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4957048-4967047 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370295 5261 Brassicaceae View MSA
123835002 5264 Brassicales-Malvales View MSA
124336629 5266 SBM View MSA
124237972 5268 Malvidae View MSA
124050403 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain