Gene : Carub.0007s1340 C. rubella v1.1
Defline:  (1 of 3) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1340
Name:  ? Carub.0007s1340 Secondary Identifier:  ? PAC:39233592
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1340 0.5kb upstream 0.5kb upstream 1679 true scaffold_7: 5057515-5059193 Capsella rubella
Carub.0007s1340 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5057515-5058014 Capsella rubella
Carub.0007s1340 0.5kb downstream 0.5kb downstream 1679 true scaffold_7: 5058015-5059693 Capsella rubella
Carub.0007s1340 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5059194-5059693 Capsella rubella
Carub.0007s1340 1.0kb upstream 1.0kb upstream 2179 true scaffold_7: 5057015-5059193 Capsella rubella
Carub.0007s1340 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5057015-5058014 Capsella rubella
Carub.0007s1340 1.0kb downstream 1.0kb downstream 2179 true scaffold_7: 5058015-5060193 Capsella rubella
Carub.0007s1340 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5059194-5060193 Capsella rubella
Carub.0007s1340 2.0kb upstream 2.0kb upstream 3179 true scaffold_7: 5056015-5059193 Capsella rubella
Carub.0007s1340 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5056015-5058014 Capsella rubella
Carub.0007s1340 2.0kb downstream 2.0kb downstream 3179 true scaffold_7: 5058015-5061193 Capsella rubella
Carub.0007s1340 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5059194-5061193 Capsella rubella
Carub.0007s1340 5.0kb upstream 5.0kb upstream 6179 true scaffold_7: 5053015-5059193 Capsella rubella
Carub.0007s1340 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5053015-5058014 Capsella rubella
Carub.0007s1340 5.0kb downstream 5.0kb downstream 6179 true scaffold_7: 5058015-5064193 Capsella rubella
Carub.0007s1340 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5059194-5064193 Capsella rubella
Carub.0007s1340 10.0kb upstream 10.0kb upstream 11179 true scaffold_7: 5048015-5059193 Capsella rubella
Carub.0007s1340 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5048015-5058014 Capsella rubella
Carub.0007s1340 10.0kb downstream 10.0kb downstream 11179 true scaffold_7: 5058015-5069193 Capsella rubella
Carub.0007s1340 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5059194-5069193 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381434 5261 Brassicaceae View MSA
123833451 5264 Brassicales-Malvales View MSA
124342045 5266 SBM View MSA
124236917 5268 Malvidae View MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain