Gene : Carub.0006s1427 C. rubella v1.1
Defline:  (1 of 2) PTHR23024//PTHR23024:SF93 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 17-RELATED Genomic Order:  1427
Name:  ? Carub.0006s1427 Secondary Identifier:  ? PAC:39248697
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1427 0.5kb upstream 0.5kb upstream 1532 true scaffold_6: 5290486-5292017 Capsella rubella
Carub.0006s1427 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5291518-5292017 Capsella rubella
Carub.0006s1427 0.5kb downstream 0.5kb downstream 1532 true scaffold_6: 5289986-5291517 Capsella rubella
Carub.0006s1427 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5289986-5290485 Capsella rubella
Carub.0006s1427 1.0kb upstream 1.0kb upstream 2032 true scaffold_6: 5290486-5292517 Capsella rubella
Carub.0006s1427 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5291518-5292517 Capsella rubella
Carub.0006s1427 1.0kb downstream 1.0kb downstream 2032 true scaffold_6: 5289486-5291517 Capsella rubella
Carub.0006s1427 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5289486-5290485 Capsella rubella
Carub.0006s1427 2.0kb upstream 2.0kb upstream 3032 true scaffold_6: 5290486-5293517 Capsella rubella
Carub.0006s1427 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5291518-5293517 Capsella rubella
Carub.0006s1427 2.0kb downstream 2.0kb downstream 3032 true scaffold_6: 5288486-5291517 Capsella rubella
Carub.0006s1427 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5288486-5290485 Capsella rubella
Carub.0006s1427 5.0kb upstream 5.0kb upstream 6032 true scaffold_6: 5290486-5296517 Capsella rubella
Carub.0006s1427 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5291518-5296517 Capsella rubella
Carub.0006s1427 5.0kb downstream 5.0kb downstream 6032 true scaffold_6: 5285486-5291517 Capsella rubella
Carub.0006s1427 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5285486-5290485 Capsella rubella
Carub.0006s1427 10.0kb upstream 10.0kb upstream 11032 true scaffold_6: 5290486-5301517 Capsella rubella
Carub.0006s1427 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5291518-5301517 Capsella rubella
Carub.0006s1427 10.0kb downstream 10.0kb downstream 11032 true scaffold_6: 5280486-5291517 Capsella rubella
Carub.0006s1427 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5280486-5290485 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374426 5261 Brassicaceae View MSA
123836923 5264 Brassicales-Malvales View MSA
124345017 5266 SBM View MSA
124253065 5268 Malvidae View MSA
124065608 5270 Rosid View MSA
123745232 5271 Pentapetalae View MSA
122791893 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain