Gene : Carub.0007s1078 C. rubella v1.1
Defline:  (1 of 2) PTHR22850:SF85 - WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED Genomic Order:  1078
Name:  ? Carub.0007s1078 Secondary Identifier:  ? PAC:39234748
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1078 0.5kb upstream 0.5kb upstream 4045 true scaffold_7: 4160430-4164474 Capsella rubella
Carub.0007s1078 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 4160430-4160929 Capsella rubella
Carub.0007s1078 0.5kb downstream 0.5kb downstream 4045 true scaffold_7: 4160930-4164974 Capsella rubella
Carub.0007s1078 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 4164475-4164974 Capsella rubella
Carub.0007s1078 1.0kb upstream 1.0kb upstream 4545 true scaffold_7: 4159930-4164474 Capsella rubella
Carub.0007s1078 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 4159930-4160929 Capsella rubella
Carub.0007s1078 1.0kb downstream 1.0kb downstream 4545 true scaffold_7: 4160930-4165474 Capsella rubella
Carub.0007s1078 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 4164475-4165474 Capsella rubella
Carub.0007s1078 2.0kb upstream 2.0kb upstream 5545 true scaffold_7: 4158930-4164474 Capsella rubella
Carub.0007s1078 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 4158930-4160929 Capsella rubella
Carub.0007s1078 2.0kb downstream 2.0kb downstream 5545 true scaffold_7: 4160930-4166474 Capsella rubella
Carub.0007s1078 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 4164475-4166474 Capsella rubella
Carub.0007s1078 5.0kb upstream 5.0kb upstream 8545 true scaffold_7: 4155930-4164474 Capsella rubella
Carub.0007s1078 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 4155930-4160929 Capsella rubella
Carub.0007s1078 5.0kb downstream 5.0kb downstream 8545 true scaffold_7: 4160930-4169474 Capsella rubella
Carub.0007s1078 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 4164475-4169474 Capsella rubella
Carub.0007s1078 10.0kb upstream 10.0kb upstream 13545 true scaffold_7: 4150930-4164474 Capsella rubella
Carub.0007s1078 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 4150930-4160929 Capsella rubella
Carub.0007s1078 10.0kb downstream 10.0kb downstream 13545 true scaffold_7: 4160930-4174474 Capsella rubella
Carub.0007s1078 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 4164475-4174474 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665420 5273 Angiosperm View MSA
122377082 5261 Brassicaceae View MSA
123801437 5264 Brassicales-Malvales View MSA
124298740 5266 SBM View MSA
124150313 5268 Malvidae View MSA
124050174 5270 Rosid View MSA
123619778 5271 Pentapetalae View MSA
122654215 5272 Eudicot View MSA
120937388 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain