Gene : Carub.0007s1394 C. rubella v1.1
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  1394
Name:  ? Carub.0007s1394 Secondary Identifier:  ? PAC:39232089
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5084 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1394 0.5kb upstream 0.5kb upstream 4094 true scaffold_7: 5257047-5261140 Capsella rubella
Carub.0007s1394 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5257047-5257546 Capsella rubella
Carub.0007s1394 0.5kb downstream 0.5kb downstream 4094 true scaffold_7: 5257547-5261640 Capsella rubella
Carub.0007s1394 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5261141-5261640 Capsella rubella
Carub.0007s1394 1.0kb upstream 1.0kb upstream 4594 true scaffold_7: 5256547-5261140 Capsella rubella
Carub.0007s1394 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5256547-5257546 Capsella rubella
Carub.0007s1394 1.0kb downstream 1.0kb downstream 4594 true scaffold_7: 5257547-5262140 Capsella rubella
Carub.0007s1394 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5261141-5262140 Capsella rubella
Carub.0007s1394 2.0kb upstream 2.0kb upstream 5594 true scaffold_7: 5255547-5261140 Capsella rubella
Carub.0007s1394 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5255547-5257546 Capsella rubella
Carub.0007s1394 2.0kb downstream 2.0kb downstream 5594 true scaffold_7: 5257547-5263140 Capsella rubella
Carub.0007s1394 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5261141-5263140 Capsella rubella
Carub.0007s1394 5.0kb upstream 5.0kb upstream 8594 true scaffold_7: 5252547-5261140 Capsella rubella
Carub.0007s1394 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5252547-5257546 Capsella rubella
Carub.0007s1394 5.0kb downstream 5.0kb downstream 8594 true scaffold_7: 5257547-5266140 Capsella rubella
Carub.0007s1394 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5261141-5266140 Capsella rubella
Carub.0007s1394 10.0kb upstream 10.0kb upstream 13594 true scaffold_7: 5247547-5261140 Capsella rubella
Carub.0007s1394 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5247547-5257546 Capsella rubella
Carub.0007s1394 10.0kb downstream 10.0kb downstream 13594 true scaffold_7: 5257547-5271140 Capsella rubella
Carub.0007s1394 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5261141-5271140 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343423 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain