Gene : Carub.0007s1427 C. rubella v1.1
Defline:  (1 of 2) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase Genomic Order:  1427
Name:  ? Carub.0007s1427 Secondary Identifier:  ? PAC:39235086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1427 0.5kb upstream 0.5kb upstream 4436 true scaffold_7: 5366124-5370559 Capsella rubella
Carub.0007s1427 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5370060-5370559 Capsella rubella
Carub.0007s1427 0.5kb downstream 0.5kb downstream 4436 true scaffold_7: 5365624-5370059 Capsella rubella
Carub.0007s1427 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5365624-5366123 Capsella rubella
Carub.0007s1427 1.0kb upstream 1.0kb upstream 4936 true scaffold_7: 5366124-5371059 Capsella rubella
Carub.0007s1427 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5370060-5371059 Capsella rubella
Carub.0007s1427 1.0kb downstream 1.0kb downstream 4936 true scaffold_7: 5365124-5370059 Capsella rubella
Carub.0007s1427 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5365124-5366123 Capsella rubella
Carub.0007s1427 2.0kb upstream 2.0kb upstream 5936 true scaffold_7: 5366124-5372059 Capsella rubella
Carub.0007s1427 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5370060-5372059 Capsella rubella
Carub.0007s1427 2.0kb downstream 2.0kb downstream 5936 true scaffold_7: 5364124-5370059 Capsella rubella
Carub.0007s1427 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5364124-5366123 Capsella rubella
Carub.0007s1427 5.0kb upstream 5.0kb upstream 8936 true scaffold_7: 5366124-5375059 Capsella rubella
Carub.0007s1427 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5370060-5375059 Capsella rubella
Carub.0007s1427 5.0kb downstream 5.0kb downstream 8936 true scaffold_7: 5361124-5370059 Capsella rubella
Carub.0007s1427 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5361124-5366123 Capsella rubella
Carub.0007s1427 10.0kb upstream 10.0kb upstream 13936 true scaffold_7: 5366124-5380059 Capsella rubella
Carub.0007s1427 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5370060-5380059 Capsella rubella
Carub.0007s1427 10.0kb downstream 10.0kb downstream 13936 true scaffold_7: 5356124-5370059 Capsella rubella
Carub.0007s1427 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5356124-5366123 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364993 5261 Brassicaceae View MSA
123832153 5264 Brassicales-Malvales View MSA
124340539 5266 SBM View MSA
124250297 5268 Malvidae View MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain