Gene : Carub.0007s1428 C. rubella v1.1
Defline:  (1 of 2) PTHR22601:SF8 - OLIGOPEPTIDE TRANSPORTER 1-RELATED Genomic Order:  1428
Name:  ? Carub.0007s1428 Secondary Identifier:  ? PAC:39232191
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1428 0.5kb upstream 0.5kb upstream 3607 true scaffold_7: 5371065-5374671 Capsella rubella
Carub.0007s1428 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5371065-5371564 Capsella rubella
Carub.0007s1428 0.5kb downstream 0.5kb downstream 3607 true scaffold_7: 5371565-5375171 Capsella rubella
Carub.0007s1428 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5374672-5375171 Capsella rubella
Carub.0007s1428 1.0kb upstream 1.0kb upstream 4107 true scaffold_7: 5370565-5374671 Capsella rubella
Carub.0007s1428 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5370565-5371564 Capsella rubella
Carub.0007s1428 1.0kb downstream 1.0kb downstream 4107 true scaffold_7: 5371565-5375671 Capsella rubella
Carub.0007s1428 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5374672-5375671 Capsella rubella
Carub.0007s1428 2.0kb upstream 2.0kb upstream 5107 true scaffold_7: 5369565-5374671 Capsella rubella
Carub.0007s1428 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5369565-5371564 Capsella rubella
Carub.0007s1428 2.0kb downstream 2.0kb downstream 5107 true scaffold_7: 5371565-5376671 Capsella rubella
Carub.0007s1428 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5374672-5376671 Capsella rubella
Carub.0007s1428 5.0kb upstream 5.0kb upstream 8107 true scaffold_7: 5366565-5374671 Capsella rubella
Carub.0007s1428 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5366565-5371564 Capsella rubella
Carub.0007s1428 5.0kb downstream 5.0kb downstream 8107 true scaffold_7: 5371565-5379671 Capsella rubella
Carub.0007s1428 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5374672-5379671 Capsella rubella
Carub.0007s1428 10.0kb upstream 10.0kb upstream 13107 true scaffold_7: 5361565-5374671 Capsella rubella
Carub.0007s1428 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5361565-5371564 Capsella rubella
Carub.0007s1428 10.0kb downstream 10.0kb downstream 13107 true scaffold_7: 5371565-5384671 Capsella rubella
Carub.0007s1428 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5374672-5384671 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381638 5261 Brassicaceae View MSA
123836474 5264 Brassicales-Malvales View MSA
124349050 5266 SBM View MSA
124248923 5268 Malvidae View MSA
124065533 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain