Gene : Carub.0007s1475 C. rubella v1.1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF418 - SUBGROUP I AMINOTRANSFERASE RELATED // 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 Genomic Order:  1475
Name:  ? Carub.0007s1475 Secondary Identifier:  ? PAC:39233781
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ETHYL-PWY Capsella rubella pathologic  
Crubella PWY-7270 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1475 0.5kb upstream 0.5kb upstream 2476 true scaffold_7: 5499077-5501552 Capsella rubella
Carub.0007s1475 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5501053-5501552 Capsella rubella
Carub.0007s1475 0.5kb downstream 0.5kb downstream 2476 true scaffold_7: 5498577-5501052 Capsella rubella
Carub.0007s1475 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5498577-5499076 Capsella rubella
Carub.0007s1475 1.0kb upstream 1.0kb upstream 2976 true scaffold_7: 5499077-5502052 Capsella rubella
Carub.0007s1475 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5501053-5502052 Capsella rubella
Carub.0007s1475 1.0kb downstream 1.0kb downstream 2976 true scaffold_7: 5498077-5501052 Capsella rubella
Carub.0007s1475 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5498077-5499076 Capsella rubella
Carub.0007s1475 2.0kb upstream 2.0kb upstream 3976 true scaffold_7: 5499077-5503052 Capsella rubella
Carub.0007s1475 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5501053-5503052 Capsella rubella
Carub.0007s1475 2.0kb downstream 2.0kb downstream 3976 true scaffold_7: 5497077-5501052 Capsella rubella
Carub.0007s1475 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5497077-5499076 Capsella rubella
Carub.0007s1475 5.0kb upstream 5.0kb upstream 6976 true scaffold_7: 5499077-5506052 Capsella rubella
Carub.0007s1475 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5501053-5506052 Capsella rubella
Carub.0007s1475 5.0kb downstream 5.0kb downstream 6976 true scaffold_7: 5494077-5501052 Capsella rubella
Carub.0007s1475 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5494077-5499076 Capsella rubella
Carub.0007s1475 10.0kb upstream 10.0kb upstream 11976 true scaffold_7: 5499077-5511052 Capsella rubella
Carub.0007s1475 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5501053-5511052 Capsella rubella
Carub.0007s1475 10.0kb downstream 10.0kb downstream 11976 true scaffold_7: 5489077-5501052 Capsella rubella
Carub.0007s1475 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5489077-5499076 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366123 5261 Brassicaceae View MSA
123834026 5264 Brassicales-Malvales View MSA
124339921 5266 SBM View MSA
124241890 5268 Malvidae View MSA
124060897 5270 Rosid View MSA
123744717 5271 Pentapetalae View MSA
122791155 5272 Eudicot View MSA
122050984 5273 Angiosperm View MSA
121312233 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain