Gene : Carub.0007s0948 C. rubella v1.1
Defline:  (1 of 1) PTHR33650//PTHR33650:SF1 - FAMILY NOT NAMED // CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN Genomic Order:  948
Name:  ? Carub.0007s0948 Secondary Identifier:  ? PAC:39233955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0948 0.5kb upstream 0.5kb upstream 3088 true scaffold_7: 3604587-3607674 Capsella rubella
Carub.0007s0948 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3604587-3605086 Capsella rubella
Carub.0007s0948 0.5kb downstream 0.5kb downstream 3088 true scaffold_7: 3605087-3608174 Capsella rubella
Carub.0007s0948 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3607675-3608174 Capsella rubella
Carub.0007s0948 1.0kb upstream 1.0kb upstream 3588 true scaffold_7: 3604087-3607674 Capsella rubella
Carub.0007s0948 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3604087-3605086 Capsella rubella
Carub.0007s0948 1.0kb downstream 1.0kb downstream 3588 true scaffold_7: 3605087-3608674 Capsella rubella
Carub.0007s0948 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3607675-3608674 Capsella rubella
Carub.0007s0948 2.0kb upstream 2.0kb upstream 4588 true scaffold_7: 3603087-3607674 Capsella rubella
Carub.0007s0948 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3603087-3605086 Capsella rubella
Carub.0007s0948 2.0kb downstream 2.0kb downstream 4588 true scaffold_7: 3605087-3609674 Capsella rubella
Carub.0007s0948 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3607675-3609674 Capsella rubella
Carub.0007s0948 5.0kb upstream 5.0kb upstream 7588 true scaffold_7: 3600087-3607674 Capsella rubella
Carub.0007s0948 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3600087-3605086 Capsella rubella
Carub.0007s0948 5.0kb downstream 5.0kb downstream 7588 true scaffold_7: 3605087-3612674 Capsella rubella
Carub.0007s0948 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3607675-3612674 Capsella rubella
Carub.0007s0948 10.0kb upstream 10.0kb upstream 12588 true scaffold_7: 3595087-3607674 Capsella rubella
Carub.0007s0948 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3595087-3605086 Capsella rubella
Carub.0007s0948 10.0kb downstream 10.0kb downstream 12588 true scaffold_7: 3605087-3617674 Capsella rubella
Carub.0007s0948 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3607675-3617674 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361291 5261 Brassicaceae View MSA
123832987 5264 Brassicales-Malvales View MSA
124321836 5266 SBM View MSA
124241036 5268 Malvidae View MSA
124066882 5270 Rosid View MSA
123744226 5271 Pentapetalae View MSA
122786508 5272 Eudicot View MSA
122044615 5273 Angiosperm View MSA
121350431 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain