Gene : Carub.0006s1478 C. rubella v1.1
Defline:  (1 of 6) K01915 - glutamine synthetase (glnA, GLUL) Genomic Order:  1478
Name:  ? Carub.0006s1478 Secondary Identifier:  ? PAC:39248553
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLNSYN-PWY Capsella rubella pathologic  
Crubella PWY-3282 Capsella rubella pathologic  
Crubella PWY-381 Capsella rubella pathologic  
Crubella PWY-6549 Capsella rubella pathologic  
Crubella PWY-6963 Capsella rubella pathologic  
Crubella PWY-6964 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1478 0.5kb upstream 0.5kb upstream 3607 true scaffold_6: 5468376-5471982 Capsella rubella
Carub.0006s1478 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5471483-5471982 Capsella rubella
Carub.0006s1478 0.5kb downstream 0.5kb downstream 3607 true scaffold_6: 5467876-5471482 Capsella rubella
Carub.0006s1478 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5467876-5468375 Capsella rubella
Carub.0006s1478 1.0kb upstream 1.0kb upstream 4107 true scaffold_6: 5468376-5472482 Capsella rubella
Carub.0006s1478 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5471483-5472482 Capsella rubella
Carub.0006s1478 1.0kb downstream 1.0kb downstream 4107 true scaffold_6: 5467376-5471482 Capsella rubella
Carub.0006s1478 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5467376-5468375 Capsella rubella
Carub.0006s1478 2.0kb upstream 2.0kb upstream 5107 true scaffold_6: 5468376-5473482 Capsella rubella
Carub.0006s1478 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5471483-5473482 Capsella rubella
Carub.0006s1478 2.0kb downstream 2.0kb downstream 5107 true scaffold_6: 5466376-5471482 Capsella rubella
Carub.0006s1478 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5466376-5468375 Capsella rubella
Carub.0006s1478 5.0kb upstream 5.0kb upstream 8107 true scaffold_6: 5468376-5476482 Capsella rubella
Carub.0006s1478 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5471483-5476482 Capsella rubella
Carub.0006s1478 5.0kb downstream 5.0kb downstream 8107 true scaffold_6: 5463376-5471482 Capsella rubella
Carub.0006s1478 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5463376-5468375 Capsella rubella
Carub.0006s1478 10.0kb upstream 10.0kb upstream 13107 true scaffold_6: 5468376-5481482 Capsella rubella
Carub.0006s1478 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5471483-5481482 Capsella rubella
Carub.0006s1478 10.0kb downstream 10.0kb downstream 13107 true scaffold_6: 5458376-5471482 Capsella rubella
Carub.0006s1478 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5458376-5468375 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376853 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain