Gene : Carub.0007s0870 C. rubella v1.1
Defline:  (1 of 29) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  870
Name:  ? Carub.0007s0870 Secondary Identifier:  ? PAC:39235652
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s0870 0.5kb upstream 0.5kb upstream 3845 true scaffold_7: 3320197-3324041 Capsella rubella
Carub.0007s0870 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3323542-3324041 Capsella rubella
Carub.0007s0870 0.5kb downstream 0.5kb downstream 3845 true scaffold_7: 3319697-3323541 Capsella rubella
Carub.0007s0870 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3319697-3320196 Capsella rubella
Carub.0007s0870 1.0kb upstream 1.0kb upstream 4345 true scaffold_7: 3320197-3324541 Capsella rubella
Carub.0007s0870 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3323542-3324541 Capsella rubella
Carub.0007s0870 1.0kb downstream 1.0kb downstream 4345 true scaffold_7: 3319197-3323541 Capsella rubella
Carub.0007s0870 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3319197-3320196 Capsella rubella
Carub.0007s0870 2.0kb upstream 2.0kb upstream 5345 true scaffold_7: 3320197-3325541 Capsella rubella
Carub.0007s0870 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3323542-3325541 Capsella rubella
Carub.0007s0870 2.0kb downstream 2.0kb downstream 5345 true scaffold_7: 3318197-3323541 Capsella rubella
Carub.0007s0870 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3318197-3320196 Capsella rubella
Carub.0007s0870 5.0kb upstream 5.0kb upstream 8345 true scaffold_7: 3320197-3328541 Capsella rubella
Carub.0007s0870 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3323542-3328541 Capsella rubella
Carub.0007s0870 5.0kb downstream 5.0kb downstream 8345 true scaffold_7: 3315197-3323541 Capsella rubella
Carub.0007s0870 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3315197-3320196 Capsella rubella
Carub.0007s0870 10.0kb upstream 10.0kb upstream 13345 true scaffold_7: 3320197-3333541 Capsella rubella
Carub.0007s0870 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3323542-3333541 Capsella rubella
Carub.0007s0870 10.0kb downstream 10.0kb downstream 13345 true scaffold_7: 3310197-3323541 Capsella rubella
Carub.0007s0870 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3310197-3320196 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374594 5261 Brassicaceae View MSA
123833894 5264 Brassicales-Malvales View MSA
124337081 5266 SBM View MSA
124237544 5268 Malvidae View MSA
124068789 5270 Rosid View MSA
123737281 5271 Pentapetalae View MSA
122788345 5272 Eudicot View MSA
122045330 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain