Gene : Carub.0007s1374 C. rubella v1.1
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1374
Name:  ? Carub.0007s1374 Secondary Identifier:  ? PAC:39234369
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s1374 0.5kb upstream 0.5kb upstream 4025 true scaffold_7: 5187123-5191147 Capsella rubella
Carub.0007s1374 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5190648-5191147 Capsella rubella
Carub.0007s1374 0.5kb downstream 0.5kb downstream 4025 true scaffold_7: 5186623-5190647 Capsella rubella
Carub.0007s1374 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5186623-5187122 Capsella rubella
Carub.0007s1374 1.0kb upstream 1.0kb upstream 4525 true scaffold_7: 5187123-5191647 Capsella rubella
Carub.0007s1374 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5190648-5191647 Capsella rubella
Carub.0007s1374 1.0kb downstream 1.0kb downstream 4525 true scaffold_7: 5186123-5190647 Capsella rubella
Carub.0007s1374 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5186123-5187122 Capsella rubella
Carub.0007s1374 2.0kb upstream 2.0kb upstream 5525 true scaffold_7: 5187123-5192647 Capsella rubella
Carub.0007s1374 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5190648-5192647 Capsella rubella
Carub.0007s1374 2.0kb downstream 2.0kb downstream 5525 true scaffold_7: 5185123-5190647 Capsella rubella
Carub.0007s1374 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5185123-5187122 Capsella rubella
Carub.0007s1374 5.0kb upstream 5.0kb upstream 8525 true scaffold_7: 5187123-5195647 Capsella rubella
Carub.0007s1374 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5190648-5195647 Capsella rubella
Carub.0007s1374 5.0kb downstream 5.0kb downstream 8525 true scaffold_7: 5182123-5190647 Capsella rubella
Carub.0007s1374 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5182123-5187122 Capsella rubella
Carub.0007s1374 10.0kb upstream 10.0kb upstream 13525 true scaffold_7: 5187123-5200647 Capsella rubella
Carub.0007s1374 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5190648-5200647 Capsella rubella
Carub.0007s1374 10.0kb downstream 10.0kb downstream 13525 true scaffold_7: 5177123-5190647 Capsella rubella
Carub.0007s1374 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5177123-5187122 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363559 5261 Brassicaceae View MSA
123838028 5264 Brassicales-Malvales View MSA
124342242 5266 SBM View MSA
124253987 5268 Malvidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain