Gene : Carub.0007s2921 C. rubella v1.1
Defline:  (1 of 2) PTHR11941//PTHR11941:SF47 - ENOYL-COA HYDRATASE-RELATED // 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  2921
Name:  ? Carub.0007s2921 Secondary Identifier:  ? PAC:39235058
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7574 Capsella rubella pathologic  
Crubella VALDEG-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2921 0.5kb upstream 0.5kb upstream 4058 true scaffold_7: 11289287-11293344 Capsella rubella
Carub.0007s2921 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11292845-11293344 Capsella rubella
Carub.0007s2921 0.5kb downstream 0.5kb downstream 4058 true scaffold_7: 11288787-11292844 Capsella rubella
Carub.0007s2921 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11288787-11289286 Capsella rubella
Carub.0007s2921 1.0kb upstream 1.0kb upstream 4558 true scaffold_7: 11289287-11293844 Capsella rubella
Carub.0007s2921 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11292845-11293844 Capsella rubella
Carub.0007s2921 1.0kb downstream 1.0kb downstream 4558 true scaffold_7: 11288287-11292844 Capsella rubella
Carub.0007s2921 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11288287-11289286 Capsella rubella
Carub.0007s2921 2.0kb upstream 2.0kb upstream 5558 true scaffold_7: 11289287-11294844 Capsella rubella
Carub.0007s2921 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11292845-11294844 Capsella rubella
Carub.0007s2921 2.0kb downstream 2.0kb downstream 5558 true scaffold_7: 11287287-11292844 Capsella rubella
Carub.0007s2921 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11287287-11289286 Capsella rubella
Carub.0007s2921 5.0kb upstream 5.0kb upstream 8558 true scaffold_7: 11289287-11297844 Capsella rubella
Carub.0007s2921 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11292845-11297844 Capsella rubella
Carub.0007s2921 5.0kb downstream 5.0kb downstream 8558 true scaffold_7: 11284287-11292844 Capsella rubella
Carub.0007s2921 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11284287-11289286 Capsella rubella
Carub.0007s2921 10.0kb upstream 10.0kb upstream 13558 true scaffold_7: 11289287-11302844 Capsella rubella
Carub.0007s2921 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11292845-11302844 Capsella rubella
Carub.0007s2921 10.0kb downstream 10.0kb downstream 13558 true scaffold_7: 11279287-11292844 Capsella rubella
Carub.0007s2921 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11279287-11289286 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369943 5261 Brassicaceae View MSA
123836675 5264 Brassicales-Malvales View MSA
124337240 5266 SBM View MSA
124241377 5268 Malvidae View MSA
124062790 5270 Rosid View MSA
123736402 5271 Pentapetalae View MSA
122794984 5272 Eudicot View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain