Gene : Carub.0007s2917 C. rubella v1.1

Defline:  (1 of 24) PF08137 - DVL family (DVL) Genomic Order:  2917
Name:  ? Carub.0007s2917 Secondary Identifier:  ? PAC:39233455

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2917 0.5kb upstream 0.5kb upstream 971 true scaffold_7: 11270411-11271381 Capsella rubella
Carub.0007s2917 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11270411-11270910 Capsella rubella
Carub.0007s2917 0.5kb downstream 0.5kb downstream 971 true scaffold_7: 11270911-11271881 Capsella rubella
Carub.0007s2917 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11271382-11271881 Capsella rubella
Carub.0007s2917 1.0kb upstream 1.0kb upstream 1471 true scaffold_7: 11269911-11271381 Capsella rubella
Carub.0007s2917 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11269911-11270910 Capsella rubella
Carub.0007s2917 1.0kb downstream 1.0kb downstream 1471 true scaffold_7: 11270911-11272381 Capsella rubella
Carub.0007s2917 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11271382-11272381 Capsella rubella
Carub.0007s2917 2.0kb upstream 2.0kb upstream 2471 true scaffold_7: 11268911-11271381 Capsella rubella
Carub.0007s2917 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11268911-11270910 Capsella rubella
Carub.0007s2917 2.0kb downstream 2.0kb downstream 2471 true scaffold_7: 11270911-11273381 Capsella rubella
Carub.0007s2917 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11271382-11273381 Capsella rubella
Carub.0007s2917 5.0kb upstream 5.0kb upstream 5471 true scaffold_7: 11265911-11271381 Capsella rubella
Carub.0007s2917 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11265911-11270910 Capsella rubella
Carub.0007s2917 5.0kb downstream 5.0kb downstream 5471 true scaffold_7: 11270911-11276381 Capsella rubella
Carub.0007s2917 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11271382-11276381 Capsella rubella
Carub.0007s2917 10.0kb upstream 10.0kb upstream 10471 true scaffold_7: 11260911-11271381 Capsella rubella
Carub.0007s2917 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11260911-11270910 Capsella rubella
Carub.0007s2917 10.0kb downstream 10.0kb downstream 10471 true scaffold_7: 11270911-11281381 Capsella rubella
Carub.0007s2917 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11271382-11281381 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371317 5261 Brassicaceae View MSA
123838094 5264 Brassicales-Malvales View MSA
124322396 5266 SBM View MSA
124245069 5268 Malvidae View MSA
124037168 5270 Rosid View MSA
123741879 5271 Pentapetalae View MSA
122796197 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain