Gene : Carub.0007s2954 C. rubella v1.1
Defline:  (1 of 16) PF04576 - Zein-binding (Zein-binding) Genomic Order:  2954
Name:  ? Carub.0007s2954 Secondary Identifier:  ? PAC:39235036
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2954 0.5kb upstream 0.5kb upstream 1509 true scaffold_7: 11485078-11486586 Capsella rubella
Carub.0007s2954 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11486087-11486586 Capsella rubella
Carub.0007s2954 0.5kb downstream 0.5kb downstream 1509 true scaffold_7: 11484578-11486086 Capsella rubella
Carub.0007s2954 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11484578-11485077 Capsella rubella
Carub.0007s2954 1.0kb upstream 1.0kb upstream 2009 true scaffold_7: 11485078-11487086 Capsella rubella
Carub.0007s2954 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11486087-11487086 Capsella rubella
Carub.0007s2954 1.0kb downstream 1.0kb downstream 2009 true scaffold_7: 11484078-11486086 Capsella rubella
Carub.0007s2954 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11484078-11485077 Capsella rubella
Carub.0007s2954 2.0kb upstream 2.0kb upstream 3009 true scaffold_7: 11485078-11488086 Capsella rubella
Carub.0007s2954 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11486087-11488086 Capsella rubella
Carub.0007s2954 2.0kb downstream 2.0kb downstream 3009 true scaffold_7: 11483078-11486086 Capsella rubella
Carub.0007s2954 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11483078-11485077 Capsella rubella
Carub.0007s2954 5.0kb upstream 5.0kb upstream 6009 true scaffold_7: 11485078-11491086 Capsella rubella
Carub.0007s2954 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11486087-11491086 Capsella rubella
Carub.0007s2954 5.0kb downstream 5.0kb downstream 6009 true scaffold_7: 11480078-11486086 Capsella rubella
Carub.0007s2954 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11480078-11485077 Capsella rubella
Carub.0007s2954 10.0kb upstream 10.0kb upstream 11009 true scaffold_7: 11485078-11496086 Capsella rubella
Carub.0007s2954 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11486087-11496086 Capsella rubella
Carub.0007s2954 10.0kb downstream 10.0kb downstream 11009 true scaffold_7: 11475078-11486086 Capsella rubella
Carub.0007s2954 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11475078-11485077 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367247 5261 Brassicaceae View MSA
123799318 5264 Brassicales-Malvales View MSA
124296851 5266 SBM View MSA
124148891 5268 Malvidae View MSA
123874803 5270 Rosid View MSA
123458725 5271 Pentapetalae View MSA
122494124 5272 Eudicot View MSA
122048719 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain