Gene : Carub.0007s3001 C. rubella v1.1
Defline:  (1 of 1) K02699 - photosystem I subunit XI (psaL) Genomic Order:  3001
Name:  ? Carub.0007s3001 Secondary Identifier:  ? PAC:39232561
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PHOTOALL-PWY Capsella rubella pathologic  
Crubella PWY-101 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3001 0.5kb upstream 0.5kb upstream 1488 true scaffold_7: 11815200-11816687 Capsella rubella
Carub.0007s3001 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 11816188-11816687 Capsella rubella
Carub.0007s3001 0.5kb downstream 0.5kb downstream 1488 true scaffold_7: 11814700-11816187 Capsella rubella
Carub.0007s3001 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 11814700-11815199 Capsella rubella
Carub.0007s3001 1.0kb upstream 1.0kb upstream 1988 true scaffold_7: 11815200-11817187 Capsella rubella
Carub.0007s3001 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 11816188-11817187 Capsella rubella
Carub.0007s3001 1.0kb downstream 1.0kb downstream 1988 true scaffold_7: 11814200-11816187 Capsella rubella
Carub.0007s3001 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 11814200-11815199 Capsella rubella
Carub.0007s3001 2.0kb upstream 2.0kb upstream 2988 true scaffold_7: 11815200-11818187 Capsella rubella
Carub.0007s3001 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 11816188-11818187 Capsella rubella
Carub.0007s3001 2.0kb downstream 2.0kb downstream 2988 true scaffold_7: 11813200-11816187 Capsella rubella
Carub.0007s3001 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 11813200-11815199 Capsella rubella
Carub.0007s3001 5.0kb upstream 5.0kb upstream 5988 true scaffold_7: 11815200-11821187 Capsella rubella
Carub.0007s3001 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 11816188-11821187 Capsella rubella
Carub.0007s3001 5.0kb downstream 5.0kb downstream 5988 true scaffold_7: 11810200-11816187 Capsella rubella
Carub.0007s3001 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 11810200-11815199 Capsella rubella
Carub.0007s3001 10.0kb upstream 10.0kb upstream 10988 true scaffold_7: 11815200-11826187 Capsella rubella
Carub.0007s3001 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 11816188-11826187 Capsella rubella
Carub.0007s3001 10.0kb downstream 10.0kb downstream 10988 true scaffold_7: 11805200-11816187 Capsella rubella
Carub.0007s3001 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 11805200-11815199 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
122378869 5261 Brassicaceae View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain