Gene : Carub.0007s2546 C. rubella v1.1
Defline:  (1 of 4) PTHR10071:SF203 - GATA TRANSCRIPTION FACTOR 15-RELATED Genomic Order:  2546
Name:  ? Carub.0007s2546 Secondary Identifier:  ? PAC:39234321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2546 0.5kb upstream 0.5kb upstream 1944 true scaffold_7: 9675694-9677637 Capsella rubella
Carub.0007s2546 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9675694-9676193 Capsella rubella
Carub.0007s2546 0.5kb downstream 0.5kb downstream 1944 true scaffold_7: 9676194-9678137 Capsella rubella
Carub.0007s2546 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9677638-9678137 Capsella rubella
Carub.0007s2546 1.0kb upstream 1.0kb upstream 2444 true scaffold_7: 9675194-9677637 Capsella rubella
Carub.0007s2546 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9675194-9676193 Capsella rubella
Carub.0007s2546 1.0kb downstream 1.0kb downstream 2444 true scaffold_7: 9676194-9678637 Capsella rubella
Carub.0007s2546 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9677638-9678637 Capsella rubella
Carub.0007s2546 2.0kb upstream 2.0kb upstream 3444 true scaffold_7: 9674194-9677637 Capsella rubella
Carub.0007s2546 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9674194-9676193 Capsella rubella
Carub.0007s2546 2.0kb downstream 2.0kb downstream 3444 true scaffold_7: 9676194-9679637 Capsella rubella
Carub.0007s2546 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9677638-9679637 Capsella rubella
Carub.0007s2546 5.0kb upstream 5.0kb upstream 6444 true scaffold_7: 9671194-9677637 Capsella rubella
Carub.0007s2546 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9671194-9676193 Capsella rubella
Carub.0007s2546 5.0kb downstream 5.0kb downstream 6444 true scaffold_7: 9676194-9682637 Capsella rubella
Carub.0007s2546 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9677638-9682637 Capsella rubella
Carub.0007s2546 10.0kb upstream 10.0kb upstream 11444 true scaffold_7: 9666194-9677637 Capsella rubella
Carub.0007s2546 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9666194-9676193 Capsella rubella
Carub.0007s2546 10.0kb downstream 10.0kb downstream 11444 true scaffold_7: 9676194-9687637 Capsella rubella
Carub.0007s2546 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9677638-9687637 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365145 5261 Brassicaceae View MSA
123798899 5264 Brassicales-Malvales View MSA
124296475 5266 SBM View MSA
124250441 5268 Malvidae View MSA
124071529 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain