Gene : Carub.0007s2541 C. rubella v1.1
Defline:  (1 of 2) PTHR23335//PTHR23335:SF3 - CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA // CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 5-RELATED Genomic Order:  2541
Name:  ? Carub.0007s2541 Secondary Identifier:  ? PAC:39234735
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2541 0.5kb upstream 0.5kb upstream 6137 true scaffold_7: 9654155-9660291 Capsella rubella
Carub.0007s2541 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9659792-9660291 Capsella rubella
Carub.0007s2541 0.5kb downstream 0.5kb downstream 6137 true scaffold_7: 9653655-9659791 Capsella rubella
Carub.0007s2541 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9653655-9654154 Capsella rubella
Carub.0007s2541 1.0kb upstream 1.0kb upstream 6637 true scaffold_7: 9654155-9660791 Capsella rubella
Carub.0007s2541 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9659792-9660791 Capsella rubella
Carub.0007s2541 1.0kb downstream 1.0kb downstream 6637 true scaffold_7: 9653155-9659791 Capsella rubella
Carub.0007s2541 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9653155-9654154 Capsella rubella
Carub.0007s2541 2.0kb upstream 2.0kb upstream 7637 true scaffold_7: 9654155-9661791 Capsella rubella
Carub.0007s2541 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9659792-9661791 Capsella rubella
Carub.0007s2541 2.0kb downstream 2.0kb downstream 7637 true scaffold_7: 9652155-9659791 Capsella rubella
Carub.0007s2541 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9652155-9654154 Capsella rubella
Carub.0007s2541 5.0kb upstream 5.0kb upstream 10637 true scaffold_7: 9654155-9664791 Capsella rubella
Carub.0007s2541 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9659792-9664791 Capsella rubella
Carub.0007s2541 5.0kb downstream 5.0kb downstream 10637 true scaffold_7: 9649155-9659791 Capsella rubella
Carub.0007s2541 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9649155-9654154 Capsella rubella
Carub.0007s2541 10.0kb upstream 10.0kb upstream 15637 true scaffold_7: 9654155-9669791 Capsella rubella
Carub.0007s2541 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9659792-9669791 Capsella rubella
Carub.0007s2541 10.0kb downstream 10.0kb downstream 15637 true scaffold_7: 9644155-9659791 Capsella rubella
Carub.0007s2541 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9644155-9654154 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370222 5261 Brassicaceae View MSA
123835221 5264 Brassicales-Malvales View MSA
124337020 5266 SBM View MSA
124250326 5268 Malvidae View MSA
124060879 5270 Rosid View MSA
123739187 5271 Pentapetalae View MSA
122787070 5272 Eudicot View MSA
122044952 5273 Angiosperm View MSA
121310369 5274 Embryophyte View MSA
123347871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain