Gene : Carub.0007s2548 C. rubella v1.1
Defline:  (1 of 2) 2.7.1.46 - L-arabinokinase Genomic Order:  2548
Name:  ? Carub.0007s2548 Secondary Identifier:  ? PAC:39232595
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-82 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2548 0.5kb upstream 0.5kb upstream 7422 true scaffold_7: 9681364-9688785 Capsella rubella
Carub.0007s2548 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9688286-9688785 Capsella rubella
Carub.0007s2548 0.5kb downstream 0.5kb downstream 7422 true scaffold_7: 9680864-9688285 Capsella rubella
Carub.0007s2548 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9680864-9681363 Capsella rubella
Carub.0007s2548 1.0kb upstream 1.0kb upstream 7922 true scaffold_7: 9681364-9689285 Capsella rubella
Carub.0007s2548 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9688286-9689285 Capsella rubella
Carub.0007s2548 1.0kb downstream 1.0kb downstream 7922 true scaffold_7: 9680364-9688285 Capsella rubella
Carub.0007s2548 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9680364-9681363 Capsella rubella
Carub.0007s2548 2.0kb upstream 2.0kb upstream 8922 true scaffold_7: 9681364-9690285 Capsella rubella
Carub.0007s2548 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9688286-9690285 Capsella rubella
Carub.0007s2548 2.0kb downstream 2.0kb downstream 8922 true scaffold_7: 9679364-9688285 Capsella rubella
Carub.0007s2548 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9679364-9681363 Capsella rubella
Carub.0007s2548 5.0kb upstream 5.0kb upstream 11922 true scaffold_7: 9681364-9693285 Capsella rubella
Carub.0007s2548 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9688286-9693285 Capsella rubella
Carub.0007s2548 5.0kb downstream 5.0kb downstream 11922 true scaffold_7: 9676364-9688285 Capsella rubella
Carub.0007s2548 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9676364-9681363 Capsella rubella
Carub.0007s2548 10.0kb upstream 10.0kb upstream 16922 true scaffold_7: 9681364-9698285 Capsella rubella
Carub.0007s2548 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9688286-9698285 Capsella rubella
Carub.0007s2548 10.0kb downstream 10.0kb downstream 16922 true scaffold_7: 9671364-9688285 Capsella rubella
Carub.0007s2548 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9671364-9681363 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370489 5261 Brassicaceae View MSA
123834106 5264 Brassicales-Malvales View MSA
124336596 5266 SBM View MSA
124242808 5268 Malvidae View MSA
124063357 5270 Rosid View MSA
123744762 5271 Pentapetalae View MSA
122790860 5272 Eudicot View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain