Gene : Carub.0006s1251 C. rubella v1.1
Defline:  (1 of 2) K02952 - small subunit ribosomal protein S13 (RP-S13, rpsM) Genomic Order:  1251
Name:  ? Carub.0006s1251 Secondary Identifier:  ? PAC:39247965
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1251 0.5kb upstream 0.5kb upstream 1658 true scaffold_6: 4653753-4655410 Capsella rubella
Carub.0006s1251 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 4654911-4655410 Capsella rubella
Carub.0006s1251 0.5kb downstream 0.5kb downstream 1658 true scaffold_6: 4653253-4654910 Capsella rubella
Carub.0006s1251 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 4653253-4653752 Capsella rubella
Carub.0006s1251 1.0kb upstream 1.0kb upstream 2158 true scaffold_6: 4653753-4655910 Capsella rubella
Carub.0006s1251 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 4654911-4655910 Capsella rubella
Carub.0006s1251 1.0kb downstream 1.0kb downstream 2158 true scaffold_6: 4652753-4654910 Capsella rubella
Carub.0006s1251 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 4652753-4653752 Capsella rubella
Carub.0006s1251 2.0kb upstream 2.0kb upstream 3158 true scaffold_6: 4653753-4656910 Capsella rubella
Carub.0006s1251 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 4654911-4656910 Capsella rubella
Carub.0006s1251 2.0kb downstream 2.0kb downstream 3158 true scaffold_6: 4651753-4654910 Capsella rubella
Carub.0006s1251 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 4651753-4653752 Capsella rubella
Carub.0006s1251 5.0kb upstream 5.0kb upstream 6158 true scaffold_6: 4653753-4659910 Capsella rubella
Carub.0006s1251 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 4654911-4659910 Capsella rubella
Carub.0006s1251 5.0kb downstream 5.0kb downstream 6158 true scaffold_6: 4648753-4654910 Capsella rubella
Carub.0006s1251 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 4648753-4653752 Capsella rubella
Carub.0006s1251 10.0kb upstream 10.0kb upstream 11158 true scaffold_6: 4653753-4664910 Capsella rubella
Carub.0006s1251 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 4654911-4664910 Capsella rubella
Carub.0006s1251 10.0kb downstream 10.0kb downstream 11158 true scaffold_6: 4643753-4654910 Capsella rubella
Carub.0006s1251 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 4643753-4653752 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379718 5261 Brassicaceae View MSA
123829451 5264 Brassicales-Malvales View MSA
124338296 5266 SBM View MSA
124247437 5268 Malvidae View MSA
124067573 5270 Rosid View MSA
123740403 5271 Pentapetalae View MSA
122788158 5272 Eudicot View MSA
122043008 5273 Angiosperm View MSA
121343902 5274 Embryophyte View MSA
123426379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain