Gene : Carub.0007s2623 C. rubella v1.1
Defline:  (1 of 3) K02960 - small subunit ribosomal protein S16e (RP-S16e, RPS16) Genomic Order:  2623
Name:  ? Carub.0007s2623 Secondary Identifier:  ? PAC:39232235
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s2623 0.5kb upstream 0.5kb upstream 1109 true scaffold_7: 9942139-9943247 Capsella rubella
Carub.0007s2623 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9942139-9942638 Capsella rubella
Carub.0007s2623 0.5kb downstream 0.5kb downstream 1109 true scaffold_7: 9942639-9943747 Capsella rubella
Carub.0007s2623 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9943248-9943747 Capsella rubella
Carub.0007s2623 1.0kb upstream 1.0kb upstream 1609 true scaffold_7: 9941639-9943247 Capsella rubella
Carub.0007s2623 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9941639-9942638 Capsella rubella
Carub.0007s2623 1.0kb downstream 1.0kb downstream 1609 true scaffold_7: 9942639-9944247 Capsella rubella
Carub.0007s2623 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9943248-9944247 Capsella rubella
Carub.0007s2623 2.0kb upstream 2.0kb upstream 2609 true scaffold_7: 9940639-9943247 Capsella rubella
Carub.0007s2623 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9940639-9942638 Capsella rubella
Carub.0007s2623 2.0kb downstream 2.0kb downstream 2609 true scaffold_7: 9942639-9945247 Capsella rubella
Carub.0007s2623 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9943248-9945247 Capsella rubella
Carub.0007s2623 5.0kb upstream 5.0kb upstream 5609 true scaffold_7: 9937639-9943247 Capsella rubella
Carub.0007s2623 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9937639-9942638 Capsella rubella
Carub.0007s2623 5.0kb downstream 5.0kb downstream 5609 true scaffold_7: 9942639-9948247 Capsella rubella
Carub.0007s2623 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9943248-9948247 Capsella rubella
Carub.0007s2623 10.0kb upstream 10.0kb upstream 10609 true scaffold_7: 9932639-9943247 Capsella rubella
Carub.0007s2623 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9932639-9942638 Capsella rubella
Carub.0007s2623 10.0kb downstream 10.0kb downstream 10609 true scaffold_7: 9942639-9953247 Capsella rubella
Carub.0007s2623 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9943248-9953247 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374465 5261 Brassicaceae View MSA
123840261 5264 Brassicales-Malvales View MSA
124350544 5266 SBM View MSA
124243493 5268 Malvidae View MSA
124069246 5270 Rosid View MSA
123741428 5271 Pentapetalae View MSA
122794496 5272 Eudicot View MSA
122042530 5273 Angiosperm View MSA
121347858 5274 Embryophyte View MSA
123423904 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain