Gene : Carub.0007s3051 C. rubella v1.1
Defline:  (1 of 2) PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Genomic Order:  3051
Name:  ? Carub.0007s3051 Secondary Identifier:  ? PAC:39234626
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3051 0.5kb upstream 0.5kb upstream 2104 true scaffold_7: 12935748-12937851 Capsella rubella
Carub.0007s3051 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 12935748-12936247 Capsella rubella
Carub.0007s3051 0.5kb downstream 0.5kb downstream 2104 true scaffold_7: 12936248-12938351 Capsella rubella
Carub.0007s3051 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 12937852-12938351 Capsella rubella
Carub.0007s3051 1.0kb upstream 1.0kb upstream 2604 true scaffold_7: 12935248-12937851 Capsella rubella
Carub.0007s3051 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 12935248-12936247 Capsella rubella
Carub.0007s3051 1.0kb downstream 1.0kb downstream 2604 true scaffold_7: 12936248-12938851 Capsella rubella
Carub.0007s3051 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 12937852-12938851 Capsella rubella
Carub.0007s3051 2.0kb upstream 2.0kb upstream 3604 true scaffold_7: 12934248-12937851 Capsella rubella
Carub.0007s3051 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 12934248-12936247 Capsella rubella
Carub.0007s3051 2.0kb downstream 2.0kb downstream 3604 true scaffold_7: 12936248-12939851 Capsella rubella
Carub.0007s3051 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 12937852-12939851 Capsella rubella
Carub.0007s3051 5.0kb upstream 5.0kb upstream 6604 true scaffold_7: 12931248-12937851 Capsella rubella
Carub.0007s3051 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 12931248-12936247 Capsella rubella
Carub.0007s3051 5.0kb downstream 5.0kb downstream 6604 true scaffold_7: 12936248-12942851 Capsella rubella
Carub.0007s3051 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 12937852-12942851 Capsella rubella
Carub.0007s3051 10.0kb upstream 10.0kb upstream 11604 true scaffold_7: 12926248-12937851 Capsella rubella
Carub.0007s3051 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 12926248-12936247 Capsella rubella
Carub.0007s3051 10.0kb downstream 10.0kb downstream 11604 true scaffold_7: 12936248-12947851 Capsella rubella
Carub.0007s3051 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 12937852-12947851 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364422 5261 Brassicaceae View MSA
123836032 5264 Brassicales-Malvales View MSA
124347281 5266 SBM View MSA
124247271 5268 Malvidae View MSA
124074817 5270 Rosid View MSA
123743103 5271 Pentapetalae View MSA
122794733 5272 Eudicot View MSA
122042927 5273 Angiosperm View MSA
121343800 5274 Embryophyte View MSA
123427997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain