Gene : Carub.0007s3080 C. rubella v1.1
Defline:  (1 of 1) 1.11.1.7//3.1.3.2//3.1.3.38//3.1.3.41//3.1.3.58//3.1.3.60//3.1.3.9 - Peroxidase / Lactoperoxidase // Acid phosphatase / Phosphomonoesterase // 3-phosphoglycerate phosphatase // 4-nitrophenylphosphatase // Sugar-terminal-phosphatase / Xylitol-5-phosphatase // Phosphoenolpyruvate phosphatase // Glucose-6-phosphatase Genomic Order:  3080
Name:  ? Carub.0007s3080 Secondary Identifier:  ? PAC:39232644
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5083 Capsella rubella pathologic  
Crubella PWY-5466 Capsella rubella pathologic  
Crubella PWY-6348 Capsella rubella pathologic  
Crubella PWY66-399 Capsella rubella pathologic  
Crubella PWY-7214 Capsella rubella pathologic  
Crubella PWY-7445 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3080 0.5kb upstream 0.5kb upstream 3971 true scaffold_7: 13313070-13317040 Capsella rubella
Carub.0007s3080 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13316541-13317040 Capsella rubella
Carub.0007s3080 0.5kb downstream 0.5kb downstream 3971 true scaffold_7: 13312570-13316540 Capsella rubella
Carub.0007s3080 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13312570-13313069 Capsella rubella
Carub.0007s3080 1.0kb upstream 1.0kb upstream 4471 true scaffold_7: 13313070-13317540 Capsella rubella
Carub.0007s3080 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13316541-13317540 Capsella rubella
Carub.0007s3080 1.0kb downstream 1.0kb downstream 4471 true scaffold_7: 13312070-13316540 Capsella rubella
Carub.0007s3080 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13312070-13313069 Capsella rubella
Carub.0007s3080 2.0kb upstream 2.0kb upstream 5471 true scaffold_7: 13313070-13318540 Capsella rubella
Carub.0007s3080 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13316541-13318540 Capsella rubella
Carub.0007s3080 2.0kb downstream 2.0kb downstream 5471 true scaffold_7: 13311070-13316540 Capsella rubella
Carub.0007s3080 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13311070-13313069 Capsella rubella
Carub.0007s3080 5.0kb upstream 5.0kb upstream 8471 true scaffold_7: 13313070-13321540 Capsella rubella
Carub.0007s3080 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13316541-13321540 Capsella rubella
Carub.0007s3080 5.0kb downstream 5.0kb downstream 8471 true scaffold_7: 13308070-13316540 Capsella rubella
Carub.0007s3080 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13308070-13313069 Capsella rubella
Carub.0007s3080 10.0kb upstream 10.0kb upstream 13471 true scaffold_7: 13313070-13326540 Capsella rubella
Carub.0007s3080 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13316541-13326540 Capsella rubella
Carub.0007s3080 10.0kb downstream 10.0kb downstream 13471 true scaffold_7: 13303070-13316540 Capsella rubella
Carub.0007s3080 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13303070-13313069 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374881 5261 Brassicaceae View MSA
123829045 5264 Brassicales-Malvales View MSA
124345067 5266 SBM View MSA
124254435 5268 Malvidae View MSA
124069450 5270 Rosid View MSA
123747011 5271 Pentapetalae View MSA
122795635 5272 Eudicot View MSA
122047319 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain