Gene : Carub.0007s3094 C. rubella v1.1

Defline:  (1 of 18) K08770 - ubiquitin C (UBC) Genomic Order:  3094
Name:  ? Carub.0007s3094 Secondary Identifier:  ? PAC:39233661

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0007s3094 0.5kb upstream 0.5kb upstream 746 true scaffold_7: 13485039-13485784 Capsella rubella
Carub.0007s3094 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13485039-13485538 Capsella rubella
Carub.0007s3094 0.5kb downstream 0.5kb downstream 746 true scaffold_7: 13485539-13486284 Capsella rubella
Carub.0007s3094 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13485785-13486284 Capsella rubella
Carub.0007s3094 1.0kb upstream 1.0kb upstream 1246 true scaffold_7: 13484539-13485784 Capsella rubella
Carub.0007s3094 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13484539-13485538 Capsella rubella
Carub.0007s3094 1.0kb downstream 1.0kb downstream 1246 true scaffold_7: 13485539-13486784 Capsella rubella
Carub.0007s3094 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13485785-13486784 Capsella rubella
Carub.0007s3094 2.0kb upstream 2.0kb upstream 2246 true scaffold_7: 13483539-13485784 Capsella rubella
Carub.0007s3094 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13483539-13485538 Capsella rubella
Carub.0007s3094 2.0kb downstream 2.0kb downstream 2246 true scaffold_7: 13485539-13487784 Capsella rubella
Carub.0007s3094 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13485785-13487784 Capsella rubella
Carub.0007s3094 5.0kb upstream 5.0kb upstream 5246 true scaffold_7: 13480539-13485784 Capsella rubella
Carub.0007s3094 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13480539-13485538 Capsella rubella
Carub.0007s3094 5.0kb downstream 5.0kb downstream 5246 true scaffold_7: 13485539-13490784 Capsella rubella
Carub.0007s3094 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13485785-13490784 Capsella rubella
Carub.0007s3094 10.0kb upstream 10.0kb upstream 10246 true scaffold_7: 13475539-13485784 Capsella rubella
Carub.0007s3094 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13475539-13485538 Capsella rubella
Carub.0007s3094 10.0kb downstream 10.0kb downstream 10246 true scaffold_7: 13485539-13495784 Capsella rubella
Carub.0007s3094 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13485785-13495784 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381650 5261 Brassicaceae View MSA
123803358 5264 Brassicales-Malvales View MSA
124300474 5266 SBM View MSA
124248161 5268 Malvidae View MSA
124050733 5270 Rosid View MSA
123751793 5271 Pentapetalae View MSA
122795699 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain